Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00872 ATGAAGACGATAATAGAATGCTGTGTCTCTGCAAGTGCCACACGTGTCTGTGGCCTTTTGCCATACAGAAATTATAATTCATGTAATAGCATGCTTGCAAATTGTTCAGCTTCATCCTCAACAACAAGAAGAACTTTATCTCTTTCTCTCATCTCCACCACTTTCTCTGCATTCATCTTCTCACTTTCTCCTCCTTCTTCTTCCTCTTCTACTACTTCTTCTTCTTCTTCTTCTTCTTCTTCAAAATTGCCCTTATCAAAGTTCTTTGAGATCCCTGATTCAGGTGGAGTTCAGGCTTTGGACCTCCTTGATGGTTCAGGTGAAGTTCCCTCAGATGGGGATCAGGTTGCAATTCACTACTATGGCAGGCTTGCAGCAAAACAGGGATGGCGTTTTGACTCAACCTATGACCACAAAGATGACAATGGCGAACCCAATCCATTTGTCTTTGTCCTTGGCTCTGGCAAGGTTATAGCTGGAATTGATGTGGCAGTGAGATCGATGAAAGTAGGAGGTATTCGTAGAGTCATCATACCCCCATCACTTGGGTATCAAAACACATCACAAGAGCCAATCCCACCTAACTTCTTTGACAGGCAGAGGTTGTTCACTACCATTTTTAATCCAACTCGCCGTGCAAATGGAGAAGGCTCCACTTTAGGAACAGTTATATTTGATATTGAGCTGGTGAGCGTGAGGCATCAGTGA 708 0.4336 MKTIIECCVSASATRVCGLLPYRNYNSCNSMLANCSASSSTTRRTLSLSLISTTFSAFIFSLSPPSSSSSTTSSSSSSSSSKLPLSKFFEIPDSGGVQALDLLDGSGEVPSDGDQVAIHYYGRLAAKQGWRFDSTYDHKDDNGEPNPFVFVLGSGKVIAGIDVAVRSMKVGGIRRVIIPPSLGYQNTSQEPIPPNFFDRQRLFTTIFNPTRRANGEGSTLGTVIFDIELVSVRHQ 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00872 235 Gene3D - 76 232 IPR046357 GO:0003755
Viun7g00872 235 SUPERFAMILY FKBP-like 94 233 - -
Viun7g00872 235 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP17-1, CHLOROPLASTIC 29 235 IPR044197 -
Viun7g00872 235 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 109 230 IPR001179 GO:0003755
Viun7g00872 235 MobiDBLite consensus disorder prediction 63 83 - -
Viun7g00872 235 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 113 233 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00872 Viun-Chr7 7971008 7973553 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00872 73 233 Calmodulin-binding Proteins AT5G48570 30.864 6.70e-14 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00872 - - gmx:100808927 355.14