Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00866 ATGGAAATGCCTGCTAGAAGATCCAACTACTCGCTCCTCAGCCAAATTCCTGATGACCAGTTCTCTGGCGCCTCCGCACCGTCCTCTTCCGGCGACGGAAAGACAGGCCGTGCCGGCAAGTCGGACCGCGTCTTCGACTGGGACCTCGTTGCCGATCACAGGGCGGGTCAGCAGGGGGCCAACCGGATCGGAAACCTGTACTCCTCGATCGGCCTGCAGAGGCAGTCCAGCGGGAGCAGCTACGGCGAGAGCTCGCTATCCGGCGGCGGCGACTTCTACGCTCCGACGCTGTCCACAGCGGCGGCCAGTGACGCTGACGCCTTTGGTTACCTCCACGACGAGCGGAACAAGTTTTCCGAGGCTCCGGCGAGGATCGCGGGCTCCTTCGGGAAGAGCTGGGCGCAGCAGACGGAGGAAAGCTATCAGCTGCAGCTCGCGCTCGCGCTGCGTCTCTCGTCGGACGCCACGTGCGCGGATGATCCCAATTTCCTCGATCCGATGCCGGACGATGGGGCCTTGCGGCTGTCGTCATCGGCGGACGCGGTTTCACATAGGTTTTGGGTGAATGGCTGCCTGTCATATTCTGACAAAATTCCGGATGGCTTTTACTTAATTCACGGGATGGATTCTTTTGTCTGGACTGTATGCACTGATCTGCATGAAAATGGCCGAATTCCTTCAGTTGATATGCTGAAGTCTGTGAATCCCTGCATTGTTTCTTCACTTGAAGTAGTTTTGGTAGATCAACGCAGTGACCCCAGCTTAAGAGATCTGCAAAATAGAGCTCATAACATTTCTTGTAGCAGCATAACAACATCAGATGTTGTAGATCAGCTCTCCAAGCTGGTTTGCAACCGAATGGGGGGATCAGCTTCTGTTGGGGAAGATAACCTTGTTTCCATCTGGAGGGATTGCAGTAATGATCTTAAAGATTGTTTAGGATCTGTTGTTATTCCAATAGGTAGTCTATCTGTCGGCCTCTGCAGGCATCGTGCTATATTATTCAAAGTACTAGCTGATGCCATCGATTTGCCATGTCGAATTGCAAAGGGTTGTAAATATTGCAAAAGGGATGATGCCTCATCTTGTCTTGTACGATTTGGGCTCGACAGGGAATATCTTGTTGATTTAATTGGAAAGCCAGGACACTTATCTGAGCCTGATTCCTTGCTCAATGGTCCATCTTCCATCTCATTTTCTTCACCCTTGCGCTTTCCACGACTTAAACCAGCTGAACCTACCATTGATTTCAGGTCACTGGCCAAACAGTATTTCTCGGACTGTCTGTCTCTTGAACTCGTCTTTGACAACAGTTCTGCAGAGCAGTTTGATGGGAAGTACAAAGACAGGAATAACCCGAGGCCAATTTCAACAGACAGCAATAGAAATTCCCATCTTCCTCTCCATCCCCAAGATTCTCATCCCAGCACACGTGAACAGTTTTCTGAAACATATGTAGCAGGTAATGCTCCTCAGAACATTGTAGACTCGACCGTGGGAAAGTATCCACCACCAGTAAAGCATAAGCGTCCTGTTGGTATACCAACCCCTAATGATGACATGATTGAGGGCAAGAGGTTTGTTGAAGGAAGTCAACTAATTCCTAGCAAACCTACTCGAGAGCTTACACTTGACATGGAGGATTTGGACATCCCATGGAGTGATCTTGTTTTAAGAGAGAAAATTGGGTCAGGTTCTTTTGGCACTGTACATCGTGCTGAGTGGAATGGCTCGGATGTTGCTGTGAAAATTTTGATGGAACAAGATTTTCATGCTGAGCGCTTCCAGGAGTTCCTGAGGGAGGTTACAATAATGAAACGTTTGCGGCATCCAAACATTGTTTTGTTTATGGGTGCAGTCACTCAGCCCCCTAACTTATCAATCGTCACGGAATATTTATCAAGGGGTAGCTTATATAGGCTGTTGCATAGATCTGGTGCCAAAGAGGTGTTGGATGAGAGGCGTAGGCTTAGTATGGCTTATGATGTGGCAAAGGGGATGAATTATCTTCATAAACGAAACCCCCCCATTGTTCATAGAGATCTGAAATCTCCAAACCTTCTCGTTGACAAGAAATATACAGTGAAGGTTTGTGATTTTGGGCTTTCCCGTCTGAAGGCCAATACATTTCTCTCATCCAAGTCAGCTGCTGGGACTCCTGAGTGGATGGCTCCAGAGGTTCTTCGTGATGAGCCATCAAATGAGAAGTCAGATATTTACAGCTTTGGTGTAATCTTATGGGAGCTTGCAACATTGCAACAGCCATGGGTTAATTTAAATCCTGCACAGGTTGTGGCAGCTGTTGGCTTTAAGGGAAAAAGGCTTGAGATCCCACGTGATGTGAATCCCCAAGTAGCTGCCCTAATCGAGGCTTGCTGGGCCAACGAGCCTTGGAAACGACCTTCTTTTGCGAGTATTATGGATTCTTTGAGGCCATTGCTGAAACCCCCTACACCTCAACCTGGTCGTCCGAACATGTCATTACTCAGCTGA 2493 0.4866 MEMPARRSNYSLLSQIPDDQFSGASAPSSSGDGKTGRAGKSDRVFDWDLVADHRAGQQGANRIGNLYSSIGLQRQSSGSSYGESSLSGGGDFYAPTLSTAAASDADAFGYLHDERNKFSEAPARIAGSFGKSWAQQTEESYQLQLALALRLSSDATCADDPNFLDPMPDDGALRLSSSADAVSHRFWVNGCLSYSDKIPDGFYLIHGMDSFVWTVCTDLHENGRIPSVDMLKSVNPCIVSSLEVVLVDQRSDPSLRDLQNRAHNISCSSITTSDVVDQLSKLVCNRMGGSASVGEDNLVSIWRDCSNDLKDCLGSVVIPIGSLSVGLCRHRAILFKVLADAIDLPCRIAKGCKYCKRDDASSCLVRFGLDREYLVDLIGKPGHLSEPDSLLNGPSSISFSSPLRFPRLKPAEPTIDFRSLAKQYFSDCLSLELVFDNSSAEQFDGKYKDRNNPRPISTDSNRNSHLPLHPQDSHPSTREQFSETYVAGNAPQNIVDSTVGKYPPPVKHKRPVGIPTPNDDMIEGKRFVEGSQLIPSKPTRELTLDMEDLDIPWSDLVLREKIGSGSFGTVHRAEWNGSDVAVKILMEQDFHAERFQEFLREVTIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHRSGAKEVLDERRRLSMAYDVAKGMNYLHKRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKANTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDIYSFGVILWELATLQQPWVNLNPAQVVAAVGFKGKRLEIPRDVNPQVAALIEACWANEPWKRPSFASIMDSLRPLLKPPTPQPGRPNMSLLS 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00866 830 MobiDBLite consensus disorder prediction 456 480 - -
Viun7g00866 830 Gene3D Phosphorylase Kinase; domain 1 549 634 - -
Viun7g00866 830 FunFam Serine/threonine-protein kinase CTR1 635 820 - -
Viun7g00866 830 PRINTS Tyrosine kinase catalytic domain signature 737 759 IPR001245 GO:0004672|GO:0006468
Viun7g00866 830 PRINTS Tyrosine kinase catalytic domain signature 781 803 IPR001245 GO:0004672|GO:0006468
Viun7g00866 830 PRINTS Tyrosine kinase catalytic domain signature 630 643 IPR001245 GO:0004672|GO:0006468
Viun7g00866 830 PRINTS Tyrosine kinase catalytic domain signature 718 728 IPR001245 GO:0004672|GO:0006468
Viun7g00866 830 PRINTS Tyrosine kinase catalytic domain signature 671 689 IPR001245 GO:0004672|GO:0006468
Viun7g00866 830 MobiDBLite consensus disorder prediction 443 480 - -
Viun7g00866 830 CDD STKc_MAP3K-like 562 810 - -
Viun7g00866 830 MobiDBLite consensus disorder prediction 8 35 - -
Viun7g00866 830 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 136 813 - -
Viun7g00866 830 ProSitePatterns Serine/Threonine protein kinases active-site signature. 677 689 IPR008271 GO:0004672|GO:0006468
Viun7g00866 830 Pfam Protein tyrosine and serine/threonine kinase 557 810 IPR001245 GO:0004672|GO:0006468
Viun7g00866 830 MobiDBLite consensus disorder prediction 1 39 - -
Viun7g00866 830 FunFam Serine/threonine-protein kinase isoform 1 546 634 - -
Viun7g00866 830 SMART serkin_6 556 814 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g00866 830 ProSitePatterns Protein kinases ATP-binding region signature. 562 583 IPR017441 GO:0005524
Viun7g00866 830 ProSiteProfiles Protein kinase domain profile. 556 814 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g00866 830 Pfam Ethylene-responsive protein kinase Le-CTR1 179 384 - -
Viun7g00866 830 Gene3D Transferase(Phosphotransferase) domain 1 635 819 - -
Viun7g00866 830 MobiDBLite consensus disorder prediction 494 520 - -
Viun7g00866 830 SUPERFAMILY Protein kinase-like (PK-like) 534 809 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00866 Viun-Chr7 7902399 7910939 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00866 1 826 MAP Kinase Kinase Kinase AT5G03730 65.465 0.0 1010
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Viun7g00866 PK_Tyr_Ser-Thr 3.2e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00866 K14510 - gmx:100800648 1491.48