Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00858 ATGGCTTCTTGCATGTGGCTGAAGAGTGCCAGTGGTGGTGGCAGTGGGAAGAAGCCGCCGCCGAGGGACGTGCCGCCGGGGCACTTGGCGGTGATGGTGGGAGAAGAAGCAAAGAGAAGGTTTGTGATAAGGGCTGATTACCTTAACCATCCCTTGCTTCAAAAACTTTTAGACCAATATGAAGGTTATGGCTTCAACAAGAGTGGTCCTCTTGCTATACCTTGTGATGAGTACCTTTTCCAAGATATTATTCAGGCCCTTCGAGAGGGATCATCCTCTCCCCATGTGCCCCTCAAGAAGCTCCATTTCAAGGACTTTGTGCCCTTACTTCAGGACAATCATCATGGCAGAGGGAGCAGCAGCAGCAGCAACTAA 375 0.5067 MASCMWLKSASGGGSGKKPPPRDVPPGHLAVMVGEEAKRRFVIRADYLNHPLLQKLLDQYEGYGFNKSGPLAIPCDEYLFQDIIQALREGSSSPHVPLKKLHFKDFVPLLQDNHHGRGSSSSSN 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00858 124 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 13 83 IPR003676 GO:0009733
Viun7g00858 124 Pfam Auxin responsive protein 19 87 IPR003676 GO:0009733
Viun7g00858 124 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00858 Viun-Chr7 7718185 7718806 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00858 6 117 Calmodulin-binding Proteins AT4G34750 45.455 6.33e-26 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00858 K14488 - gmx:100777611 166.777
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g00858 7 7718185 7718806 Viun7g00858 7 7718185 7718806 ECH