Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00857 ATGATGATGAAGCATCACCATGTCATCTTCCTGCTCTTTTTATTTTTCTTACCGTTTTTCACCTTCAGTCTCCACCACAATGATACTCATGCACTCACCCTCTTCCGCCGCCAAAGCGACCTTCACGGCTACCTTCTTTCCAACTGGACCGCCGGAGACGCCTGCGCCGCCGCCTGGCGCGGCGTCCTCTGCTCCCCGAACGGCCGCGTCACCGCCCTCTCCCTGCCTTCCCTCAACCTCCGCGGCACCCTCGACCCTCTCACTCCCCTCACCCACCTACGCCTCCTTGACCTCCACGACAATCGCTTGAACGGCACCGTTTCGTCGCTCCTCTCCAACTGCACCAACATCCAACTGCTCTACCTCGCCGGCAACGACTTCTCCGGCGAGATCCAGCCGGAGATATCCTCCCTCAAATCCCTTATCCGCCTCGACCTCTCCGACAACAACATTCGCGGCAAGGTTGACTTCCTCTCCAACTTAACACAACTAATCACACTGAGACTCCAGAACAACCTTCTCTCCGGTGAAATCCCTGACCTATCTGCCTCCATGCAAAACCTCACAGAAGTCAACATGACAAACAATGCCTTCTACGGTCGTTTACCAAACCCCATGCTGAAGAAATTCGGTGTCACGGCCTTCTCGGGTAACGAGGGTTTATGTGGTGCAACGCCGTTACCTGTGTGTTCCTTCACCACGAACCCTCCTAACGATAATGAGAATAACAATGAAAACGAACCGTCCCAGACAGTTCCTTCAAACCCCAGTTCCTTCCCGGAAACCAGCATAATAGCTCGACCGGGGAAGGAGCGTCATAAGGGTTTAAGCCCCGGTGCCATTGTGGCAATTGTTGTGGGGAATTGTGTGGCGTTGCTTGTGATGACATCATTTCTCGTGGCGCATTGTTGCGCGAGGGGGAGAGGGTCTAGTTTGGTGGGGAGTGGGGAGAGTTATGGGAAGAGGAAGAGTGGGAGCAGTTACAATGGGAGTGAGAAGAAGGTGTATGGAAGTGGTGGTGGTGAGAGTGATGGGACTACTGGGACTGATAGGAGTAGGCTTGTGTTTTTTGATCGGAGGAGTGAGTTCGAGTTGGAGGATCTGCTGCGAGCCTCGGCGGAGATGCTTGGGAAGGGTAGTTTGGGGACGGTTTATAGGGCAGTGCTTGATGATGGGTGCACCGTGGCGGTGAAGAGGCTGAAGGATGCCAACCCTTGCCCCAGGCATGAGTTTGAGCAGTACATGGATGTGATTGGGAAGCTTAAGCACCCCAATGTTGTGAGACTCAAAGCCTATTACTATGCCAAGGAGGAAAAGCTTCTTGTCTATGACTATCTCTCTAATGGAAGCTTGCATGCTCTTCTTCATGGGAACCGTGGTCCGGGGAGGATTCCATTGGATTGGACTACAAGAATAAGCCTGGTGTTGGGAGCAGCAAGAGGTCTTGCGAAGATCCACGCAGAGTACAGTGCAGCCAAAGTGCCTCACGGGAACGTGAAATCTTCGAACGTGCTTCTGGACAAGAACGGCGTGGCCTGCATCTCGGACTTCGGGCTATCACTCCTGTTGAACCCGGTTCACGCCATTGCACGATTGGGAGGGTACAGGGCCCCCGAACAGGAACAGCACAAGAGGTTGTCTCAGCAGGCTGACGTGTACAGCTTCGGGGTGTTGCTGTTGGAAGTTCTCACAGGAAGAGCTCCTTCGTCGCAGTACCCTTCACCGGCTCGTCCCAGAATGGAGGAAGAGGAACAGGCGGTGGTGGACCTTCCGAAATGGGTTCGCTCCGTCGTGAAGGAAGAGTGGACCGCAGAGGTGTTTGACCAGGAGCTTTTGCGCTACAAGAACATCGAGGAAGAGCTTGTGTCCATGCTGCATGTGGGGTTGGCCTGTGTGGTGGCGCAGCCGGAGAAGAGGCCAACTATGGAAGAAGTTGTGAAGATGGTTGAGGAGATCAGGGTGGAGCAATCGCCTCTTGGGGAGGACTATGATGAATCGCGCAATTCGCTTTCACCTTCCATTCCCACCACTGAAGATGGTCTAGCTTAG 2049 0.5403 MMMKHHHVIFLLFLFFLPFFTFSLHHNDTHALTLFRRQSDLHGYLLSNWTAGDACAAAWRGVLCSPNGRVTALSLPSLNLRGTLDPLTPLTHLRLLDLHDNRLNGTVSSLLSNCTNIQLLYLAGNDFSGEIQPEISSLKSLIRLDLSDNNIRGKVDFLSNLTQLITLRLQNNLLSGEIPDLSASMQNLTEVNMTNNAFYGRLPNPMLKKFGVTAFSGNEGLCGATPLPVCSFTTNPPNDNENNNENEPSQTVPSNPSSFPETSIIARPGKERHKGLSPGAIVAIVVGNCVALLVMTSFLVAHCCARGRGSSLVGSGESYGKRKSGSSYNGSEKKVYGSGGGESDGTTGTDRSRLVFFDRRSEFELEDLLRASAEMLGKGSLGTVYRAVLDDGCTVAVKRLKDANPCPRHEFEQYMDVIGKLKHPNVVRLKAYYYAKEEKLLVYDYLSNGSLHALLHGNRGPGRIPLDWTTRISLVLGAARGLAKIHAEYSAAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVHAIARLGGYRAPEQEQHKRLSQQADVYSFGVLLLEVLTGRAPSSQYPSPARPRMEEEEQAVVDLPKWVRSVVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVAQPEKRPTMEEVVKMVEEIRVEQSPLGEDYDESRNSLSPSIPTTEDGLA 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00857 682 MobiDBLite consensus disorder prediction 311 347 - -
Viun7g00857 682 Gene3D Ribonuclease Inhibitor 21 89 IPR032675 -
Viun7g00857 682 Gene3D Ribonuclease Inhibitor 90 236 IPR032675 -
Viun7g00857 682 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 12 654 IPR046959 -
Viun7g00857 682 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Viun7g00857 682 Pfam Protein kinase domain 374 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g00857 682 FunFam pollen receptor-like kinase 1 341 445 - -
Viun7g00857 682 ProSiteProfiles Leucine-rich repeat profile. 140 162 IPR001611 GO:0005515
Viun7g00857 682 SUPERFAMILY L domain-like 25 206 - -
Viun7g00857 682 Gene3D Phosphorylase Kinase; domain 1 346 445 - -
Viun7g00857 682 Gene3D Transferase(Phosphotransferase) domain 1 446 670 - -
Viun7g00857 682 ProSiteProfiles Protein kinase domain profile. 370 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g00857 682 MobiDBLite consensus disorder prediction 656 682 - -
Viun7g00857 682 SUPERFAMILY Protein kinase-like (PK-like) 374 650 IPR011009 -
Viun7g00857 682 MobiDBLite consensus disorder prediction 233 262 - -
Viun7g00857 682 MobiDBLite consensus disorder prediction 233 263 - -
Viun7g00857 682 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 446 661 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00857 Viun-Chr7 7695520 7698381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00857 21 678 Receptor kinase-like Gene Family AT2G36570 67.259 0.0 871
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Viun7g00857 Pkinase 8.4e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00857 - - gmx:100804135 1167.91