Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00848 ATGGATGAGATAACGATTTTGCAACAGGTTGCGGAGGGAGACCCTGACGATAAGAAATGCGTGGTGAAGCTTTTGGACCATTTCAAGCATTCTGGTCCCAATGGGCAGCATGTCTGCATGGTGTTTGAGTACCTTGGGGACAATCTTTTGACACTTATTAAGTACTCGGATTACCGTGGGTTGCCTATCGCCATGGTTAAGGAAATTTGCTTTCATATTCTTGTTGGATTGGATTACTTGCACAAACAGCTTTCCATCATACATACTGACTTGAAGCCTGAAAACATCCTGCTTTTGTCGATGATTGATCCATCTAAGGATCCTAGGAAGTCTGGGGCGCAGCTTATTCTTCCTAATAGTAAGGATAAGATGGTGCTAGAGTCGTCAGGTGTGAAAGATACGAAGATGTTGAATGGGGATTTGGTTAAGAATCACAAGAAGAAGATTAAGAGAAAAGCTAAACAAGCAGCCCATGGTTGTTTTGAGAAGGAAGTTTCTGAAGGAGTTGAGGGCAATCCTGAAACTTCTGGGGCTGTGGAGTCATCTCCTAATGCGAGTTCTACAAGGGAACATGCTTCCAGTTCTGCAGGAACTAGTAGGTTATCGGATGCTGATGGAACCAAGTTGAAAGAGCAGGGTAACAAAAGAGGAAGCCGATCAATGAGACAGAAGCTGCTGGCATCAGTTGATCTCAAGTGCAAGTTAGTGGACTTTGGTAATGCCTGCTGGACATATAAACAATTTACTAATGATATCCAGACAAGACAGTATCGGTGCCCAGAGGTTATTCTTGGGTCAAAATATTCTACTTCTGCAGATCTTTGGTCCTTTGCTTGCATTTGTTTTGAGCTTGCAACTGGAGATGTGTTATTTGATCCTCACAGTGGTGACAACTTTGATAGGGATGAGGACCACTTAGCATTAATGATGGAACTTCTTGGAACGATGCCACGTAAGATAGCTCTAGGGGGGCGTTATTCCCGTGATTTCTTTAATAGATATGGTGATTTAAGGCACATCCGGCGATTGCGATTCTGGCCCTTGAATAAAGTCCTCATGGAGAAGTATGATTTCAGTGAGAAAGATGCAAATGATTTGACGGACTTTTTGGTTCCTATTCTTAATTTTGTTCCTGAAAAGCGGCCTACAGCTGGTGAGTGTCTTCTGCATCCTTGGATGAATGGAGGTCCACGTCTTTTGGAGCCATCCGTGCCTTCTAATCACAACCCAGCTGCCGAAACTGCTGTTTTGGATCAGAAGAAAAGGGAAAAAGATGAGAGGGAGGCCATGGAGGCAGGAATGGGAAATATTGTTATCAATTCAGATTCTAAATCACTGATGCAATCACCATCAAAGAAAGCTTTCCAATCCACCCAGTAG 1380 0.4333 MDEITILQQVAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGDNLLTLIKYSDYRGLPIAMVKEICFHILVGLDYLHKQLSIIHTDLKPENILLLSMIDPSKDPRKSGAQLILPNSKDKMVLESSGVKDTKMLNGDLVKNHKKKIKRKAKQAAHGCFEKEVSEGVEGNPETSGAVESSPNASSTREHASSSAGTSRLSDADGTKLKEQGNKRGSRSMRQKLLASVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVILGSKYSTSADLWSFACICFELATGDVLFDPHSGDNFDRDEDHLALMMELLGTMPRKIALGGRYSRDFFNRYGDLRHIRRLRFWPLNKVLMEKYDFSEKDANDLTDFLVPILNFVPEKRPTAGECLLHPWMNGGPRLLEPSVPSNHNPAAETAVLDQKKREKDEREAMEAGMGNIVINSDSKSLMQSPSKKAFQSTQ 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00848 459 Gene3D Transferase(Phosphotransferase) domain 1 13 103 - -
Viun7g00848 459 MobiDBLite consensus disorder prediction 164 221 - -
Viun7g00848 459 FunFam Serine/threonine-protein kinase SRPK-like protein 223 393 - -
Viun7g00848 459 MobiDBLite consensus disorder prediction 175 202 - -
Viun7g00848 459 MobiDBLite consensus disorder prediction 415 431 - -
Viun7g00848 459 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 1 419 - -
Viun7g00848 459 SUPERFAMILY Protein kinase-like (PK-like) 2 407 IPR011009 -
Viun7g00848 459 SMART serkin_6 1 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g00848 459 ProSitePatterns Serine/Threonine protein kinases active-site signature. 86 98 IPR008271 GO:0004672|GO:0006468
Viun7g00848 459 ProSiteProfiles Protein kinase domain profile. 1 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g00848 459 MobiDBLite consensus disorder prediction 204 218 - -
Viun7g00848 459 Pfam Protein kinase domain 226 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g00848 459 Pfam Protein kinase domain 3 99 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g00848 459 MobiDBLite consensus disorder prediction 438 459 - -
Viun7g00848 459 MobiDBLite consensus disorder prediction 403 459 - -
Viun7g00848 459 Gene3D Transferase(Phosphotransferase) domain 1 227 393 - -
Viun7g00848 459 Gene3D Phosphorylase Kinase; domain 1 2 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00848 Viun-Chr7 7557380 7567311 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00848 1 444 EF-hand Containing Proteins AT5G22840 67.857 0.0 603
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Viun7g00848 Pkinase 4.2e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00848 K08832 - gmx:100803070 858.981