Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00829 ATGCAGGACGCGACAATGGTGGTGCCTCCATGGTTTGAGCCACTCCTAACCACATCGTTTTTCAATGTGTGTCGCGTTCATGGAGACGCTGCGAGAAGCGAATGTAACATGTTTTGTTTGGATTGTAACGAGGATGCGTTTTGCTTCTATTGCCGATCCTCGCGACACAAAGATCACCGAGTGATTCAGATAAGGCGATCTTCGTATCACGATGTGGTGAGGGTGTCGGAAATTCAGAAGGTGTTGGACATCAGTGGAGTGCAAACGTATGTGATTAACAGTGCGAGAGTTTTGTTTCTGAACGAGAGGCCTCAACCGAAGTCAGGGAAAGGCGTTGCTCACATTTGTGAGATTTGTGGAAGAAGCCTCTTGGACCCATTTCGGTTCTGTTCTTTGGGGTGTAAGCTTGTGGGAATAAAGAGAAATGGGGATTTGGATTCTAAAAACGAGACACCAACAATGGAGGGCATGTCAAGGAGATTGGTTTCTTCAAGGCATCACCAAGAAGAAGAATTGCGTGAAGGCTCACAACAAGACATGTACCCGGCCACGCCTTCTCCACCTGCTTCAAACGCAAGGCGAAGAAAAGGCATTCCTCATAGGGCACCTTTTGCCTCCTAA 621 0.4767 MQDATMVVPPWFEPLLTTSFFNVCRVHGDAARSECNMFCLDCNEDAFCFYCRSSRHKDHRVIQIRRSSYHDVVRVSEIQKVLDISGVQTYVINSARVLFLNERPQPKSGKGVAHICEICGRSLLDPFRFCSLGCKLVGIKRNGDLDSKNETPTMEGMSRRLVSSRHHQEEELREGSQQDMYPATPSPPASNARRRKGIPHRAPFAS 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00829 206 Pfam PLATZ transcription factor 65 136 IPR006734 -
Viun7g00829 206 SUPERFAMILY B-box zinc-binding domain 22 66 - -
Viun7g00829 206 MobiDBLite consensus disorder prediction 160 176 - -
Viun7g00829 206 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 5 204 - -
Viun7g00829 206 MobiDBLite consensus disorder prediction 145 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00829 Viun-Chr7 7362188 7364149 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Viun7g00829 PLATZ 9.8e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00829 - - gmx:100809455 395.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g00829 7 7362188 7364149 Viun7g00829 7 7362188 7364149 ECH