Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00828 ATGGACGCGACAATGGTGGTGCCTCCATGGTTTGAGCCACTCCTAACCACATCGTTTTTCAATGTGTGTCGCGTTCATGGAGACGCTGCGAGAAGCGAATGTAACATGTTTTGTTTGGATTGTAACGAGGATGCGTTTTGCTTCTATTGCCGATCCTCGCGACACAAAGATCACCGAGTGATTCAGATAAGGCGATCTTCGTATCACGATGTGGTGAGGGTGTCGGAAATTCAGAAGGTGTTGGACATCAGTGGAGTGCAAACGTATGTGATTAACAGTGCGAGAGTTTTGTTTCTGAACGAGAGGCCTCAACCGAAGTCAGGGAAAGGCGTTGCTCACATTTGTGAGATTTGTGGAAGAAGCCTCTTGGACCCATTTCGGTTCTGTTCTTTGGGGTGTAAGCTTGTGGGAATAAAGAGAAATGGGGATTTGGATTCTAAAAACGAGACACCAACAATGGAGGGCATGTCAAGGAGATTGGTTTCTTCAAGGCATCACCAAGAAGAAGAATTGCGTGAAGGCTCACAACAAGACATGTACCCGGCCACGCCTTCTCCACCTGCTTCAAACGCAAGGCGAAGAAAAGGCATTCCTCATAGGGCACCTTTTGCCTCCTAA 618 0.4757 MDATMVVPPWFEPLLTTSFFNVCRVHGDAARSECNMFCLDCNEDAFCFYCRSSRHKDHRVIQIRRSSYHDVVRVSEIQKVLDISGVQTYVINSARVLFLNERPQPKSGKGVAHICEICGRSLLDPFRFCSLGCKLVGIKRNGDLDSKNETPTMEGMSRRLVSSRHHQEEELREGSQQDMYPATPSPPASNARRRKGIPHRAPFAS 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00828 205 SUPERFAMILY B-box zinc-binding domain 21 65 - -
Viun7g00828 205 Pfam PLATZ transcription factor 64 135 IPR006734 -
Viun7g00828 205 Coils Coil 203 205 - -
Viun7g00828 205 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 5 203 - -
Viun7g00828 205 MobiDBLite consensus disorder prediction 159 175 - -
Viun7g00828 205 MobiDBLite consensus disorder prediction 144 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00828 Viun-Chr7 7362188 7364152 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Viun7g00828 PLATZ 9.7e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00828 - - gmx:100809455 395.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02444 1 34857138 34858658 Viun7g00828 7 7362188 7364152 PCT