Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00811 ATGGAGACCATTGGTTCTGTGGATGACCTCTTGGATTTTTCGTTGGACATAGGTGAGGAAGATGATGACGAAGACAAACACAGGAAATCCTGTCCTTCACTTAACTCAAAATGTGGCAATCCATCATTGTTTAACTCATTGGTACCAGAGGATCCGAACCATTCATATTCTGAGTTTGTGGAGGAGGAGCTTGAATGGCTATCCAACAAAGATGCATTTCCTTCTGTTGAAACATTTGTTGACTTATCATCTATTCAACCTGATACAGCCAAGATAAAAAAATCAACCCCAGTAACAACCCCAGTACTTGAGGACAGCACAGGCAGTAACAACAGTAATAACAGCAGTAACAGTATTTCCCTCTTAAACAGCTGTGATCACCTTAAGGTTCCAGTCCGTGCTCGTAGCAAGAGGCGCAGTCGGTGTCGCCCTGGCATTGCTGACGAAAACTCTGGTCAGCAAGTTTGGTGGAGACAACCAAGTAATGAAATTTCCAAGGCAGAAGAAGGGATGAAAATCTCACCAATTGGGAGGAAATGTCAGCACTGTGGAGCTGAAAAAACTCCACAGTGGAGGGCAGGTCCCCTTGGGCCAAAAACACTTTGTAATGCATGTGGGGTTAGGTTTAAGTCTGGTCGGCTTGTGCCTGAATACCGTCCTGCTAGTAGCCCAACTTTTCGTAGTGATTTGCATTCTAATTCCCACAGGAAGATAGTAGAGATGAGGAGGCAGAAGCAAATGGGAATGGGATAA 753 0.4462 METIGSVDDLLDFSLDIGEEDDDEDKHRKSCPSLNSKCGNPSLFNSLVPEDPNHSYSEFVEEELEWLSNKDAFPSVETFVDLSSIQPDTAKIKKSTPVTTPVLEDSTGSNNSNNSSNSISLLNSCDHLKVPVRARSKRRSRCRPGIADENSGQQVWWRQPSNEISKAEEGMKISPIGRKCQHCGAEKTPQWRAGPLGPKTLCNACGVRFKSGRLVPEYRPASSPTFRSDLHSNSHRKIVEMRRQKQMGMG 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00811 250 Pfam GATA zinc finger 180 213 IPR000679 GO:0006355|GO:0043565
Viun7g00811 250 Gene3D - 176 247 IPR013088 GO:0006355|GO:0008270
Viun7g00811 250 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 176 237 - -
Viun7g00811 250 PANTHER GATA TRANSCRIPTION FACTOR 6 246 - -
Viun7g00811 250 FunFam GATA transcription factor 169 249 - -
Viun7g00811 250 ProSitePatterns GATA-type zinc finger domain. 180 205 IPR000679 GO:0006355|GO:0043565
Viun7g00811 250 SMART GATA_3 174 224 IPR000679 GO:0006355|GO:0043565
Viun7g00811 250 CDD ZnF_GATA 179 227 IPR000679 GO:0006355|GO:0043565
Viun7g00811 250 MobiDBLite consensus disorder prediction 92 117 - -
Viun7g00811 250 ProSiteProfiles GATA-type zinc finger domain profile. 174 210 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00811 Viun-Chr7 7112577 7127025 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00811 61 250 C2C2-Gata Transcription Factor Family AT3G24050 48.131 3.58e-51 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Viun7g00811 GATA 8.7e-17 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00811 - - gmx:100784527 403.675