Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00785 ATGGCGGAAGAACACCGATGCGAGACTCCGGAAGGTCACCGTCTCTGCGCCAACAACTGCGGCTTCTTCGGTAGCTCTGCTACCATGAACCTCTGCTCCAAATGCTACGGCGCGATCCGTTTGAAGGAGCAGGACGACGCGTCGACCAAATCCGCCATCGAAACCGCGCTCTCTTCCTCCGCGAAGACGCCGCTGTCCACGGCGCCTCCGGCGGCGATTGATGTCCTTCTGGAAGCATCGCCTCCGCCTCCGCTTCCTGCAGAAGCTGCGGTCGCGGTTCCGGTCCAGGTCGCGGTGGCGACGAGTTCTTCATCCTCAGGTTCGGCGCAACCGAACCGGTGTGCCGCGTGTCGGAAGCGCGTGGGGTTGACTGGGTTCAAGTGCAGGTGCGGAGTCACGTTTTGCGGGACCCACAGGTATCCGGAGAAGCACGCGTGCGGGTTCGACTTTAAGACGGTGGGGCGAGAGGAGATTGCTCGGGCTAACCCCGTGATCAAAGCAGAGAAGCTGCGGAGGATATGA 522 0.6188 MAEEHRCETPEGHRLCANNCGFFGSSATMNLCSKCYGAIRLKEQDDASTKSAIETALSSSAKTPLSTAPPAAIDVLLEASPPPPLPAEAAVAVPVQVAVATSSSSSGSAQPNRCAACRKRVGLTGFKCRCGVTFCGTHRYPEKHACGFDFKTVGREEIARANPVIKAEKLRRI 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00785 173 Gene3D - 1 64 - -
Viun7g00785 173 Gene3D - 92 169 IPR035896 -
Viun7g00785 173 ProSiteProfiles Zinc finger A20-type profile. 10 44 IPR002653 GO:0003677|GO:0008270
Viun7g00785 173 SUPERFAMILY AN1-like Zinc finger 104 168 IPR035896 -
Viun7g00785 173 FunFam Zinc finger AN1-type containing 6 89 169 - -
Viun7g00785 173 ProSiteProfiles Zinc finger AN1-type profile. 108 154 IPR000058 GO:0008270
Viun7g00785 173 Pfam A20-like zinc finger 14 36 IPR002653 GO:0003677|GO:0008270
Viun7g00785 173 SMART A20_3 13 37 IPR002653 GO:0003677|GO:0008270
Viun7g00785 173 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 15 58 - -
Viun7g00785 173 SMART AN1_Zf_4 114 151 IPR000058 GO:0008270
Viun7g00785 173 Pfam AN1-like Zinc finger 114 150 IPR000058 GO:0008270
Viun7g00785 173 PANTHER AN1-TYPE ZINC FINGER PROTEIN 13 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00785 Viun-Chr7 6793408 6794911 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00785 1 173 C2H2 Transcription Factor Family AT3G52800 53.977 4.94e-55 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00785 - - gmx:100813749 251.136