Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00761 ATGGGGCGTGTAAGGACGAAGACAGTGAAGAAGTCGTCAAGGCAAGTGATAGAGAGGTATTACTCTCGCATGACGCTGGACTTCCACACCAACAAGAAGGTTCTGGAAGAGGTGGCTATCATTCCATCGAAGAGGCTGCGCAACAAAATCGCTGGTTTCTCCACGCATCTCATGAAGCGCATCCAGAAGGGACCGGTGCGCGGCATCTCCCTGAAGCTGCAGGAGGAGGAGCGTGAGCGCCGCATGGACTTCGTCCCCGAAGTCTCTGCCATCCGGATCGACCAGATCGAGGTCGACAAGGAGACCATCGACATGCTCGCCGCCCTCGGAATGTCCGATGTCCCCGGCGTCGTCAAGGTCGATCCGGTTCCCGTACAAGCACCGCTCGCCTTCGGTCGCGGCGCCGGCGGAAGGAGGTATTAA 423 0.5839 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKVLEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPEVSAIRIDQIEVDKETIDMLAALGMSDVPGVVKVDPVPVQAPLAFGRGAGGRRY 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00761 140 PANTHER 40S RIBOSOMAL PROTEIN S17 1 122 IPR001210 GO:0003735|GO:0005840|GO:0006412
Viun7g00761 140 FunFam 40S ribosomal protein S17 1 62 - -
Viun7g00761 140 Pfam Ribosomal S17 1 120 IPR001210 GO:0003735|GO:0005840|GO:0006412
Viun7g00761 140 Gene3D - 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Viun7g00761 140 SUPERFAMILY Rps17e-like 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Viun7g00761 140 Hamap 30S ribosomal protein S17e [rps17e]. 1 63 IPR001210 GO:0003735|GO:0005840|GO:0006412
Viun7g00761 140 ProSitePatterns Ribosomal protein S17e signature. 41 56 IPR018273 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00761 Viun-Chr7 6411647 6412383 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00761 1 140 Cytoplasmic Ribosomal Protein Gene Family AT5G04800 81.560 3.65e-81 233