Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00690 ATGGCTGGAGCGAGGGAGCAAGATCAGTACATGCCAATAGCAAATGTGCTGAGGATCATGCGAAGGATCTTGCCACCACATGCAAAAATCTCCGACGAAGCTAAAGAGACCATTCAAGAATGTGTCTCGGAGTACATTAGCTTCATCACTGCCGAAGCCAATGACCGATGCCAGCGCGAACAACGTAAGACAGTGACTGCTGAAGATGTCTTGTGGGCTATGGGAAAACTTGGTTTTGATGACTATGCTCAATCTCTTTCTGTTTACCTGAATCGTTATCGCCAAAGTGAAGGAGAACGCATGTCTGGGGGGAGACGTGGTTCTACTTCTGTTCCTCCAATGGAGCTTAACCCACCTTTTCATCCTTATCCTCCTCATGGCTTTGGAATGTTTGATTATGATCCATCACACTCCATAGCTTCTTCTTCCAGATCAGGTGGATTTGTTCAAAACTTTGACCCTTATGCTAATCCAAACCCTAATCCAAACCCTTATGCTCATCCAAACCCTAATCCAAACCTCCATGAGTTTGACCCTTTTGGTAATCCAAGACCTGCTGATGAAAATAATAATAATAATAATAATCATCGCATGTGA 597 0.4389 MAGAREQDQYMPIANVLRIMRRILPPHAKISDEAKETIQECVSEYISFITAEANDRCQREQRKTVTAEDVLWAMGKLGFDDYAQSLSVYLNRYRQSEGERMSGGRRGSTSVPPMELNPPFHPYPPHGFGMFDYDPSHSIASSSRSGGFVQNFDPYANPNPNPNPYAHPNPNPNLHEFDPFGNPRPADENNNNNNNHRM 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00690 198 SUPERFAMILY Histone-fold 7 101 IPR009072 GO:0046982
Viun7g00690 198 Gene3D Histone, subunit A 2 114 IPR009072 GO:0046982
Viun7g00690 198 MobiDBLite consensus disorder prediction 140 198 - -
Viun7g00690 198 MobiDBLite consensus disorder prediction 140 156 - -
Viun7g00690 198 FunFam Nuclear transcription factor Y subunit B-6 1 112 - -
Viun7g00690 198 PRINTS CCAAT-binding transcription factor subunit A signature 57 75 - -
Viun7g00690 198 PRINTS CCAAT-binding transcription factor subunit A signature 38 56 - -
Viun7g00690 198 PRINTS CCAAT-binding transcription factor subunit A signature 76 94 - -
Viun7g00690 198 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 4 170 IPR027113 GO:0001228|GO:0006355|GO:0016602
Viun7g00690 198 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 11 74 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00690 Viun-Chr7 5700597 5701611 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00690 4 111 CCAAT-HAP3 Transcription Factor Family AT5G47670 75.000 1.79e-56 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Viun7g00690 CBFD_NFYB_HMF 2.4e-24 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00690 K08065 - gmx:100811633 219.55