Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00679 ATGGCTATGGAACTTGTTGCTGGACCTTTAATGGGAGCTGTTTTCAATGTGTTGCTTGAAAGGATAGCTTCCACTGAGGTTGTCAACTTCTTCAAGAACAAAAACTGTGAGAAGTTGCTCAAAAGGTTGAAGATCATCTTGCTGTCAGTGAATGTTGTTCTCAATGATGCTGAGGAAAAGCAAATGAAAAATGGGGCAGTGAAGGAGTGGCTTGAGGAACTCAAAGATGTGGCCTTTGCTGCTGAGGACCTACTTGATGAGATCTACACTGATGCAAAGATGAAGGCAAAACAGGTAAACACACTCCACACTGGTCCTGTCAGTTTTTATTGTAAAGGGGTTGAAGAGAAAATTGAAGATGTTCATGAGAGATTAGAGTTTATCATGAGACAGAAAGAAGTGCTTGATCTGAAGGTGGGTAAGGAAGTCAAAATGTCACAGAAGACTCCAACCTCATCTGTAATGGAAGCATGTGATGTGTACGGAAGGGATAATGATAAAGAATCCTTGGTTGACTTGGTGTTGACTCATGATGAGAAAATAGGTGTTATTCCCATTGTTGGAATGGGAGGAATTGGAAAAACCACCTTAGCTCAACTGATATACAATGATCAAAGAGTGCAGAAGGAGTTTGATCTCAAAGCCTGGATTTATGTCTCTGAGGAATTTGACATTTGTAAGATTACAAAAACCCTTTTGGAGGCTGTCACGTCTTGTAGTTGTGACACTGAGGATTTAAATTTTCTGCAGAGGGATCTCAAAATGCATGTAATGAAGAAAAAGTTTTTGTTTGTGTTGGATGACGTGTGGAACGAAAATTATGACAATTGGGACAAGTTCAGGAGTCCATTTAAGCATGCAGGGGAACATGGAAGTAAGATTATTGTAACTACTCGAAGTGGGTGTGTTGCATCCATCATGCAGACTGTTTCACCCTATAATCTCAGAGAGTTGTCAAATGAAGATTCCTGGAATTTATTTTCAAAACACGCATTTGATTATGGTGATTCAAGTTTGCAATTGCATCAAAGTTTAGACAAAGTTGGGAGAGAAATAGTGAGGAAGTGCAAAGGGTTGCCTTTGGCTGTGAAGACACTTGCAGGACTTTTGAGGTGTAAAAGTGATAGACAAGAATGGTGTAAAGTACTGAACAGTGAGATATGGGATTTGCATGATTCTGAGAGTAACATTCTTCCGGCTTTGAGATTAAGCTACCATTACCTCCCATCACATTTGAAGAGATGTTTTGCTTATTGTGCAATTTTCCCAAAAGATTATGAATTTGAGAAGGAGAACCTGGTTTTGTTGTGGATGGCAGAGGGTTTTCTCCAACAATCCAAAAGACATAGAAGAATAGAAGAAGTTGGCAATGAGTACTTCTGTGAACTAGTATCTAGATCATTTTTCCAGCAATCAAGGCGTGGCAAGTCATGTTTTCTAATGCATCACCTTGTAAATGATTTGGCTCAGTTTGTGTCAGGAACATTTTCTATCAGAATGGAATGTAGCAATACTAATGAAATCAAAGAAAGAACTCGCCATTTGTCCCACATTATTGCAGATAGTTCCTCATACGTAAACCTGAAAGATGCTAGCAAAGCAAATTGCTTACGCACTTTTCTGCAAATAAGACCAGTAGGTACATCCATTGATTTGTTCAACAACATGCCAAATGATCTGTTAACAAAGTTAAGGTGCTTAAGGGTGCTATCTTTGGTAGGTACACATATCTATAGCTTACCTAATTCAGTAGGTGAACTAAAGCATCTCCGCTATCTGGAAGTGGCTGATACTGAGATTGTGAGGTTACCCAAATCCATCTGCAGCTTGTTCAATTTACAAACTCTCAAGTTAGTTGGATGTCACAATCTTATTGAACTGCCAGCAAGTATTCATAAGCTTGTTAACCTGCGCCACTTGGATATCAGAGGAACAAGTTTAAGGTGGATGCCATTGCAAATCAATGAGTTAAACAACCTCCAAAATTTGAGTGACTTTTTTGTGGGAAAGGGGTGTGGATCTTCCATCGGTGAATTGGGTGAGCTATCATGCTTACATGGAGAATTGTTCATTCATTGCCTAGAACATATTGTTAGTGAGAAGGATTGCGAGAAGGCAAAGTTAAAGGAAAAGCAAGGTCTTGAAAAGTTGTCTTTGGAATGGTGTGGGAATGGTGAAACTGATAACTCACAGAAAGAAAAAACCATACTGAACAGCCTGCAACCACATACAAATTTGAAGAACCTAGATATCTATGACTATCCAGGAACAGAATTTCCAGAGTGGTTGGGAGATCACTCCTTCTACAATTTGGTGTCCGTACTGCTTAATGGCAGTAAATATTGCTACAAGCTGCCTCCCCTTGGACAACTTCCAATGTTGAAAGAGCTTCAGATCAGTAAATTTGAGGGACTAGTGAGTGTGGGATCTGAGTTTCTTGGAAACAGAACCTCTTACGTAACCGATTGCTTTCCTGCACTAGAAATTCTAAGGATTGAGTATATGCCATCATGGGAGAAATGGTATCCTAATGCTGAAAATGCAGGAACCAAAGCTTTCTTTCATCTGAGAGAGTTTCATATTGGTAACTGTCCCAAACTGAGAGGAGATTTACCAGATAAACTTCCATCTTTGACATTACTTGTAATCAGAGATTGTAAACGTTTACTTTGTTCACTTCCTAATTCTCCATCTCTGCGCGTGCTGAATGTTCAGAATTGTGAGAGTCTAGAATTCCAAGTACACTCACCTTGTTGCCATCAATCACTGACATCATTGTTCTTGCACGGTAGCTGCGACTCACTCGTGTTCTTGCCTTTAGATCTCTTCCCCAACATCAAGTCTTTAGATATATGGGGGTGTAAAAATCTTGAAGCACTTACTGTTTCAGAATCAGATTCAACTCCTCCAACTTTCAAGTCCCTCCATTCCTTGCGCATAAGACACTGTCCGAATTTCACATCATTTCCCAAGGGTGGATTTGCAGCATCAAAGCTCACTTTGTTAACCATCAACTACTGTCAGAAGTTGAATTCTCTGCCTGAACAAATGCATGACCTTATGCCAAGTTTGAAGGAAGTTCAACTGAGGGGATGTCCCAAAATTGAGTCATCAAGAATGAGGCCACTCAGGATCAGGATTTGCAGCAAACACATGGAAGGCAAACAAAACCTCTCTGATCCTCTCTTTGCAAGGTTGAAAGGTTTGGCCACTGATCAAAGCCCCTCATCAAGTTAG 3237 0.4004 MAMELVAGPLMGAVFNVLLERIASTEVVNFFKNKNCEKLLKRLKIILLSVNVVLNDAEEKQMKNGAVKEWLEELKDVAFAAEDLLDEIYTDAKMKAKQVNTLHTGPVSFYCKGVEEKIEDVHERLEFIMRQKEVLDLKVGKEVKMSQKTPTSSVMEACDVYGRDNDKESLVDLVLTHDEKIGVIPIVGMGGIGKTTLAQLIYNDQRVQKEFDLKAWIYVSEEFDICKITKTLLEAVTSCSCDTEDLNFLQRDLKMHVMKKKFLFVLDDVWNENYDNWDKFRSPFKHAGEHGSKIIVTTRSGCVASIMQTVSPYNLRELSNEDSWNLFSKHAFDYGDSSLQLHQSLDKVGREIVRKCKGLPLAVKTLAGLLRCKSDRQEWCKVLNSEIWDLHDSESNILPALRLSYHYLPSHLKRCFAYCAIFPKDYEFEKENLVLLWMAEGFLQQSKRHRRIEEVGNEYFCELVSRSFFQQSRRGKSCFLMHHLVNDLAQFVSGTFSIRMECSNTNEIKERTRHLSHIIADSSSYVNLKDASKANCLRTFLQIRPVGTSIDLFNNMPNDLLTKLRCLRVLSLVGTHIYSLPNSVGELKHLRYLEVADTEIVRLPKSICSLFNLQTLKLVGCHNLIELPASIHKLVNLRHLDIRGTSLRWMPLQINELNNLQNLSDFFVGKGCGSSIGELGELSCLHGELFIHCLEHIVSEKDCEKAKLKEKQGLEKLSLEWCGNGETDNSQKEKTILNSLQPHTNLKNLDIYDYPGTEFPEWLGDHSFYNLVSVLLNGSKYCYKLPPLGQLPMLKELQISKFEGLVSVGSEFLGNRTSYVTDCFPALEILRIEYMPSWEKWYPNAENAGTKAFFHLREFHIGNCPKLRGDLPDKLPSLTLLVIRDCKRLLCSLPNSPSLRVLNVQNCESLEFQVHSPCCHQSLTSLFLHGSCDSLVFLPLDLFPNIKSLDIWGCKNLEALTVSESDSTPPTFKSLHSLRIRHCPNFTSFPKGGFAASKLTLLTINYCQKLNSLPEQMHDLMPSLKEVQLRGCPKIESSRMRPLRIRICSKHMEGKQNLSDPLFARLKGLATDQSPSSS 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00679 1078 Gene3D - 13 126 - -
Viun7g00679 1078 FunFam Probable disease resistance protein At5g66910 317 404 - -
Viun7g00679 1078 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 419 IPR027417 -
Viun7g00679 1078 FunFam Probable disease resistance protein At1g63360 405 491 - -
Viun7g00679 1078 Pfam Rx N-terminal domain 11 94 IPR041118 -
Viun7g00679 1078 Gene3D - 404 491 IPR036388 -
Viun7g00679 1078 SUPERFAMILY L domain-like 547 993 - -
Viun7g00679 1078 FunFam Probable disease resistance protein At1g61300 143 312 - -
Viun7g00679 1078 Coils Coil 111 131 - -
Viun7g00679 1078 Pfam NB-ARC domain 175 404 IPR002182 GO:0043531
Viun7g00679 1078 Gene3D Ribonuclease Inhibitor 531 845 IPR032675 -
Viun7g00679 1078 PRINTS Disease resistance protein signature 183 198 - -
Viun7g00679 1078 PRINTS Disease resistance protein signature 256 270 - -
Viun7g00679 1078 PRINTS Disease resistance protein signature 356 370 - -
Viun7g00679 1078 PRINTS Disease resistance protein signature 894 910 - -
Viun7g00679 1078 Gene3D - 141 311 IPR027417 -
Viun7g00679 1078 Gene3D - 317 403 IPR042197 -
Viun7g00679 1078 PANTHER DISEASE RESISTANCE PROTEIN RP 61 832 IPR044974 GO:0006952
Viun7g00679 1078 Gene3D Ribonuclease Inhibitor 869 963 IPR032675 -
Viun7g00679 1078 Gene3D Ribonuclease Inhibitor 964 1056 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00679 Viun-Chr7 5493300 5496934 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00679 155 651 WRKY Transcription Factor Family AT5G45050 22.538 4.14e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00679 - - vum:124831962 2072.36