Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00678 ATGGTTATTCTGCCGAGCTTAGTTCAGAACCAATTAATGTTATACTTGAGAGGCTGGAGCAAGAGGCTTTTGCTAAGGTTTGGACTCAAGGCCTTGGAAGCTAGTTCTGAAGGTCAAAGTGTTCCAGATGTTCCCGAAGCACAAATGGTTAATGAGCAACTTTGGGTTGATAAATATGCTCCAAAATCCTTCACCGAGCTTCTCAGTGATGAACAGACAAATCGTGAGGTACTGTTATGGTTGAAGCAATGGGATTCTGTTGTGTTTGGATCTGAAATTCGAAGCACATCAGATGATGTTTTGTCTGCTTTGAAACGCCATTCTTCTATTGTCCACAATCAGAAACCTTTGAATTCAAAGTTTCCTAGGAAGAATGGAGGATCCAAATGGAGTAACGGGGGAAGGTATGTAAATTCTGTAAGTATGGATGAGAGTGGGAGTTCAAAGAGTATTCAAGATGCATGGAGTACGAAGTCAAGGAATATTGGTCCCCCAGAACAAAAGATCCTTCTGCTAAGTGGACCACCAGGTCTTGGAAAAACAACACTAGCACATGTAGCTGCCAAGCATTGTGGATATCATGTGGTAGAGATTAATGCTAGTGATGATCGTTCTACATCAACAATTGAAGCCAAGATTCTTGATGTGGTTCAAATGAACTCTGTCTTGTCTGATTCAAGGCCGAAGTGTCTGGTGGTGGATGAAATTGATGGAGCTCTTGGTGACGGTAAGGGTGCTGTGGAGGTTCTTCTAAAGATGATTTCTTCCGAAAGGAAGCCTGATGCGGGGAAACAAACTGTGGGCAAAGGACAACTGGAGAGAAAGTCATCAAAAAAGGGTTCAAAAACTGCTTCACTTTCAAGACCTGTGATATGCATTTGTAATGACCTATATGCACCTGCCTTAAGACCATTGCGTCAGGTAGCCAAGGTTCATATATTTGTTCAACCAACAGTCAATCGTGCAGTGAGCAGGCTGACATACATATGCAAGAAGGAGGGGATGAAAGCCAGTGCAATTGCACTCACTGCTCTTGCAGAATATACAGAATGTGATATTAGATCATGCTTGAACACTCTCCAATTTCTCTCAAAGAAGAAAGAAGATCTCAATGTGTTTGATATTGGTTCTCAAGTAGTTGGCCAGAAGGACACATCAAAGAATGTTTTTGACATCTGGAAAGAGATTTTCCATAAGCGAAGAACAAAAAAGTCGGAAAGAAAATCTCATAGAGGGAATTCCTTTGACTTTGACTCACTGTACTCCCTTGTGTCAAAACGAGGTGATAGTGACTTGATTCTGGATGGAATTCATGAAAATGTTTTGCGGCTCAATTATCATGACCCACTGATGCAGAAAACTGTCAAGTGCTTCAACAATCTTGGAGTTTATGATCTATTGCATCAATATATAGTGCATACACATCAGATGTCCCTTTATGTATATTTGCCCCTAGTTGCAATTACTGTACATCATATAGTATCTCAAGTTCAGAAACCAAACATTGAGTGGCCAAAGTCCTATCAGAGATATCGTACAATGATGACAGAAAAAATGGACATTTTAAATAATTGGCACCACAAAATCCCACCGCATATTGCAAGGCACTTATCAGCTAGTTCCTTTGTGGAAGACTTAATTTCTCCGTTGTTACATATTCTGTCCCCACCAACTATAAGACCGGTGGCATTACAATTACTATCTGACACGGAGAAGAATGATCTTGCTCAATTAGTTAGCAAAATGGTATCATATGCTATAACATATAAAACTGTGAAATCAGATATGCTGCATCAAACCCTGAAGTCCGAATTAGCAGATGGTTTGGCACTGTCTTTTGTTCCTCCTATAAGTGACTTTATAAACTTCAAGGATTATACTTCAAATCATTATGTGCTTTCTGTAGCTATGAAGCAGCTTTTGGTACATGAGGTTGAAAAGCATAAGATTTTACAAGTTGGTGTTGACAAAACTAGGGCTTTAGCAAATGAAGGGCATGAAATCATTGAGACTGGAACTCCCAACATCCCATTAGCCAATACCAATGTTGTGGCAAGGAAATCAAATGCAAATCCCACAATAGTTTCATCCAACTTGAATACAGATAAAAGTTCAAGTGCAAAAGATATTGGAAAACCACAAAACGTGGGAAATATTAAAAAAGCAACCAGAAGTTCCTCCAGTTTCTTTGATAGGTTTAAAAAGGTAAATATTAAGGGCGTAGAAAGTAATGACAGATCTCTACCAGAAGAAGCTATCTTGGAGAAAGATCGATACCCTTTACTTTTTAAATACAATGAGGGCTTTACTAATGCAGTCAAAAGGCCTGTCCGTATTCGGGAATTTCTATCTTAA 2355 0.3936 MVILPSLVQNQLMLYLRGWSKRLLLRFGLKALEASSEGQSVPDVPEAQMVNEQLWVDKYAPKSFTELLSDEQTNREVLLWLKQWDSVVFGSEIRSTSDDVLSALKRHSSIVHNQKPLNSKFPRKNGGSKWSNGGRYVNSVSMDESGSSKSIQDAWSTKSRNIGPPEQKILLLSGPPGLGKTTLAHVAAKHCGYHVVEINASDDRSTSTIEAKILDVVQMNSVLSDSRPKCLVVDEIDGALGDGKGAVEVLLKMISSERKPDAGKQTVGKGQLERKSSKKGSKTASLSRPVICICNDLYAPALRPLRQVAKVHIFVQPTVNRAVSRLTYICKKEGMKASAIALTALAEYTECDIRSCLNTLQFLSKKKEDLNVFDIGSQVVGQKDTSKNVFDIWKEIFHKRRTKKSERKSHRGNSFDFDSLYSLVSKRGDSDLILDGIHENVLRLNYHDPLMQKTVKCFNNLGVYDLLHQYIVHTHQMSLYVYLPLVAITVHHIVSQVQKPNIEWPKSYQRYRTMMTEKMDILNNWHHKIPPHIARHLSASSFVEDLISPLLHILSPPTIRPVALQLLSDTEKNDLAQLVSKMVSYAITYKTVKSDMLHQTLKSELADGLALSFVPPISDFINFKDYTSNHYVLSVAMKQLLVHEVEKHKILQVGVDKTRALANEGHEIIETGTPNIPLANTNVVARKSNANPTIVSSNLNTDKSSSAKDIGKPQNVGNIKKATRSSSSFFDRFKKVNIKGVESNDRSLPEEAILEKDRYPLLFKYNEGFTNAVKRPVRIREFLS 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00678 784 MobiDBLite consensus disorder prediction 260 281 - -
Viun7g00678 784 FunFam Chromosome transmission fidelity protein 18 317 384 - -
Viun7g00678 784 Gene3D - 317 387 - -
Viun7g00678 784 SMART AAA_5 166 320 IPR003593 GO:0016887
Viun7g00678 784 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 53 365 IPR027417 -
Viun7g00678 784 CDD HLD_clamp_RFC 317 375 - -
Viun7g00678 784 Pfam ATPase family associated with various cellular activities (AAA) 170 295 IPR003959 GO:0005524|GO:0016887
Viun7g00678 784 Gene3D - 52 315 IPR027417 -
Viun7g00678 784 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 30 783 - -
Viun7g00678 784 CDD AAA 165 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00678 Viun-Chr7 5468032 5490510 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00678 167 364 Core DNA Replication Machinery Family AT5G22010 30.986 1.53e-14 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00678 K11269 - gmx:100785041 1293.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g00678 7 5468032 5490510 Viun7g00678 7 5468032 5490510 ECH