Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00637 ATGTTGAGAATGAATAAAGGGTCACTTGATTACTGGAGGAATTACTTTGGAGCTGCGAACTCTGACATATTTGGCATCATTGACCATGCGATCATGGTGGCTGCTTCTGATTGCCCCGAGGAGTTCAGGATGAGGAGGGATGGGATTGCAGAGAGGTTGTTTTCTTGCAGACTGAGTCGATGTTTGGGGTGTGAGCGGGTGGAATTGGCTGTCCCAGTGGATGATGACGGTGGTGAAAGTGGTGGTGCTTGTAAGAATGGATTTGAAGGGACTGGTGCTGAGTTTGAGTCTGAAGCAGGCGCAAGTAAAGAGAGCAAGGTCAATAGTGCCAGCGTTGATGATCCTGGAGTGATGAACACGAACCGAGTTAGCAATTACAGCTATGGGGAAGCTGAGGCGTTGACTGATGAGATTGAAGAAGAGTCACAATATGTCGAAGAGGTGTTCAGGATCAAGGATGTTTTGCTTAACTGTGAAGAAGAGTCTGATTCAGTTTTGTTTGATTCATTGAGGAGGCTTCAGCTGATGGAACTCACAGTGGATCTTTTGAAGGCAACTGAGATTGGAAAGGCCGTCAATCCTCTTCGAAAGCATGGATCAAGTGACATTTGTCAACTGGCGCGGACTCTTATCGAAGGCTGGAAGGAAATGGTGGATGAGTGGGTCAAGGCTACCACAGCTATTGCAGGTTCAGAAGGTACTCCAGATTCAGTAAATCCATCTGTTATTGATGATGAAGAAGGTCTTCCATCACCTCCTATGGATGAAGGGGCTCTATTTGCCCCTCCAACTGGTTCTATGGAACTCTCCCAGTTCTTTGATGGCATGGATGATGATGGAAATCCTCGACATAGTGGGGAATTCACCAAAAACCGTGATCATGGAAGAAGTCCAACTCTGAAGAGGAGACCTCAGGCATCAAATGAGGCAAACATTATTGCCAAGGAGGGTAAGGGTCAGCAAGCAAAGAAAAATGAGGTTGCTGTGAGGCCGAATAAACCAGTTATCGGTGATTCTGGTCCTGGCAGACCACCAAAGTCAACCATGCAGAAGAAAGGCTCTGTTGAGCCAAAGGTGCAACAAAATACAGTGAAGAATACTATCCCAAAAAATCCTCATGTTCGTCAGCTAGATAAACCCAGGTGTTCGGATGATGCTTCAGTCCAAGTGAAGTTAGAAGCCAGTAAGAGGAAACTTCAGGAGCGGTATCAACAAGTTGAAAATGCTAAGAGGCAGAGGACAGTACAGGTTATGGAGTTGCATGACCTCCCAAAGCAAGGTATTGGCCACCGGAATCCGCATGTGAAACCCGGAAATCACAAGAAGCAATGGGGTCATGGACGAAGATAG 1350 0.4652 MLRMNKGSLDYWRNYFGAANSDIFGIIDHAIMVAASDCPEEFRMRRDGIAERLFSCRLSRCLGCERVELAVPVDDDGGESGGACKNGFEGTGAEFESEAGASKESKVNSASVDDPGVMNTNRVSNYSYGEAEALTDEIEEESQYVEEVFRIKDVLLNCEEESDSVLFDSLRRLQLMELTVDLLKATEIGKAVNPLRKHGSSDICQLARTLIEGWKEMVDEWVKATTAIAGSEGTPDSVNPSVIDDEEGLPSPPMDEGALFAPPTGSMELSQFFDGMDDDGNPRHSGEFTKNRDHGRSPTLKRRPQASNEANIIAKEGKGQQAKKNEVAVRPNKPVIGDSGPGRPPKSTMQKKGSVEPKVQQNTVKNTIPKNPHVRQLDKPRCSDDASVQVKLEASKRKLQERYQQVENAKRQRTVQVMELHDLPKQGIGHRNPHVKPGNHKKQWGHGRR 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00637 449 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 143 232 IPR035441 -
Viun7g00637 449 MobiDBLite consensus disorder prediction 277 300 - -
Viun7g00637 449 MobiDBLite consensus disorder prediction 353 370 - -
Viun7g00637 449 MobiDBLite consensus disorder prediction 434 449 - -
Viun7g00637 449 Coils Coil 389 416 - -
Viun7g00637 449 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED 4 437 IPR044805 -
Viun7g00637 449 SMART TFS2_5 145 220 IPR003617 GO:0005634
Viun7g00637 449 ProSiteProfiles TFIIS N-terminal domain profile. 146 221 IPR017923 -
Viun7g00637 449 MobiDBLite consensus disorder prediction 228 387 - -
Viun7g00637 449 CDD TFIIS_I 146 219 - -
Viun7g00637 449 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 136 229 IPR035441 -
Viun7g00637 449 MobiDBLite consensus disorder prediction 424 449 - -
Viun7g00637 449 MobiDBLite consensus disorder prediction 372 387 - -
Viun7g00637 449 Pfam TFIIS helical bundle-like domain 170 218 IPR017923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00637 Viun-Chr7 5076921 5083155 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Viun7g00637 Med26 1.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00637 - - gmx:100775579 781.941