Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00610 ATGGACGCTTCAAAGTCCTTTGGGAAAAGGCATAATGATGGCTTCCGTAGCCCTTCCTCTGGCAAAGAATTGAGTGAAGTGTTTTTGAAACGCAGGAAGGTGAATCGAGCATTGGTGACATTCAGGAACTTGTTCGACAAGCTAATGCATCAGTACAAAATGTACGAACCTGGGAATCCGAAGGTTAAGAATAAAGCTCTGTTGGATGCAGCAATGACAATGAAAAGTGAACATCAATGGGAGAACACTCAAAAGCGCGTGGGACATGTACTAGGAATCGAAGTGGGTGATGTTTTTCAGTACTGGGTGGAACTCAATGTCATTGGCCTCCATAAGCAGTTTTGGCATGGAATTGATTATAAGATAATGGACAACGGCTCGTTGGCCACAAGCATTGTAGTAACAGATCGCTATGATAATGCTAGGAAATCTAATGGGACATTGGTTTATGAAGGTCATGGAGGAAATCCTGCTGTTGGGAAAAATGTTTCACTTCGTGATCAAAAACTGGAAGGAGGAAATTTGGCGCTGAAAAATAGCATGCAAGCTAGAAGTCCAGTGAGAGTTATATTGAAAGTTTGTGGAAAGTTTGATGGTGCATTCAGTTCCAGTAGCAGTAATTCTCATTACTCATATGTTTATGATGGTTTGTATTTGGTGGATACAATGAACATAGAAAGAGGGAGATATGGAAAGCTTGTGTTCAAGTTTGGACTGAATAGGATTTTGGGACAACCTCCAACTTGTGTTTCCCTTAAGGACCATGATGAAAATTCTAGTCAACTTGCAAGTTTTAGTGCTAGGAAGAAACTCAAACCGAAAGATTGTGATGCTGAAAAGGAGGTTGTTCGAGTTGAAGATCTTTCAAATGGTAGGGAGAAGTTTGCTATTAGGGTGGTGGCTCCAAGTGATTGTGTTCAGCTACCCACATCCTTTGTTTATGTTGTAAGTAACATTTACTCCAAGAAGTTCGAGCAGGCAACTCTTTCTGGCTGTGATTGTGCTGATGGGTGTGTTGACAAAGAAAATTGTGTCTGCTTGAGGAAGAAAAAGGGTAGCAAAATGCCGAATGGTTGTAATAAAAGAAGACTTGCTTCTGGGATGGAATCATCGGTTATATATGAGTGTGGCCCATCTTGCAAGTGCTTCTCTTCTTGCATCAACCGAGTAACTCAGCATGGTATTCAGTTTCAGCTAGAAATCTTCATGACAGAACAGAAAGGTTGGGGTGTTAGAACACGCTCATTCATTCCCTGTGGAAGCTTTGTATGTGAGTATATTGGAGAAATCAATGACTATATGGAGGCTAGATGGAGGCTAGATAGTGACTATATATTTCACATGGGTGTTGGAAAGGTCTTCATCAATGCAAGCAAATTTGGAAATGTTGGAAGATTCATAAATCATAGTTGTTCTCCAAATCTCCGTATAAAAAATGTTCAGTATGATCACAGTGACAAGAATCTTCCCCACAAGATGCTGTTTGCTGTAAAGGACATTCCTGCTGGTAAAGAGCTGAGTTATGACTATAATTCCTTCAATGGAAAATTTATCAAGTGTAGGAGTAATAGCTGCTACTGCGGAACACCGGAATGCAATGGACGGATCTACATTTAA 1617 0.4051 MDASKSFGKRHNDGFRSPSSGKELSEVFLKRRKVNRALVTFRNLFDKLMHQYKMYEPGNPKVKNKALLDAAMTMKSEHQWENTQKRVGHVLGIEVGDVFQYWVELNVIGLHKQFWHGIDYKIMDNGSLATSIVVTDRYDNARKSNGTLVYEGHGGNPAVGKNVSLRDQKLEGGNLALKNSMQARSPVRVILKVCGKFDGAFSSSSSNSHYSYVYDGLYLVDTMNIERGRYGKLVFKFGLNRILGQPPTCVSLKDHDENSSQLASFSARKKLKPKDCDAEKEVVRVEDLSNGREKFAIRVVAPSDCVQLPTSFVYVVSNIYSKKFEQATLSGCDCADGCVDKENCVCLRKKKGSKMPNGCNKRRLASGMESSVIYECGPSCKCFSSCINRVTQHGIQFQLEIFMTEQKGWGVRTRSFIPCGSFVCEYIGEINDYMEARWRLDSDYIFHMGVGKVFINASKFGNVGRFINHSCSPNLRIKNVQYDHSDKNLPHKMLFAVKDIPAGKELSYDYNSFNGKFIKCRSNSCYCGTPECNGRIYI 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00610 538 ProSiteProfiles SET domain profile. 397 511 IPR001214 GO:0005515
Viun7g00610 538 SMART set_7 397 517 IPR001214 GO:0005515
Viun7g00610 538 Pfam SET domain 408 511 IPR001214 GO:0005515
Viun7g00610 538 MobiDBLite consensus disorder prediction 1 17 - -
Viun7g00610 538 Pfam Pre-SET motif 289 389 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Viun7g00610 538 ProSiteProfiles Post-SET domain profile. 521 537 IPR003616 -
Viun7g00610 538 SMART G9a_1 83 245 IPR003105 -
Viun7g00610 538 Gene3D - 69 264 IPR036987 -
Viun7g00610 538 MobiDBLite consensus disorder prediction 1 21 - -
Viun7g00610 538 ProSiteProfiles Pre-SET domain profile. 330 394 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Viun7g00610 538 ProSiteProfiles YDG domain profile. 88 241 IPR003105 -
Viun7g00610 538 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 30 530 - -
Viun7g00610 538 SUPERFAMILY PUA domain-like 70 253 IPR015947 -
Viun7g00610 538 SMART preset_2 285 381 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Viun7g00610 538 SUPERFAMILY SET domain 277 519 IPR046341 -
Viun7g00610 538 Pfam SAD/SRA domain 87 245 IPR003105 -
Viun7g00610 538 Gene3D SET domain 265 521 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00610 Viun-Chr7 4795086 4798096 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00610 66 534 Su(var)3-9 homologs AT1G73100 35.812 5.19e-80 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Viun7g00610 SAD_SRA 6e-38 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00610 - - vun:114192587 1110.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g00610 7 4795086 4798096 Viun7g00610 7 4795086 4798096 ECH