Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00606 ATGGGCGTCGAAAACTACCACGTGATTGAACTCGTAGGCGAGGGTTCCTTCGGGAAGGTATACAAGGGAAGGCGCAAGCACACGGGGCAGACCGTTGCAATGAAGTTCATAATGAAGCACGGGAAAACTGAGAAGGATATTCACAATTTAAGGCAGGAAATCGAGATCTTAAGAAAGTTGAAGCATGGAAATATTATTCAAATGCTTGATTCCTTTGAAAGCCCGCAAGAATTTTGTGTCGTTACAGAATTTGCACAAGGTGAGCTATTTGAGATTCTCGAAGATGATAAGTGCCTTCCGGAAGACCAAGTTCAAGCAATTGCAAAGCAATTGGTAAAAGCTTTACACTATTTGCATTCCAATCGGATCATCCATCGCGATATGAAGCCCCAAAATATTCTAATTGGTGCTGGATCTGTTGTCAAGCTTTGTGATTTTGGGTTTGCACGTGCAATGTCCACAAATACAGTTGTTTTGCGATCAATAAAAGGCACTCCGTTATATATGGCTCCAGAGCTTGTACGTGAACAACCTTACAACCACACTGTAGATTTATGGTCTCTTGGCGTCATACTGTATGAGTTATTTGTTGGCCAACCACCATTTTACACAAATTCTGTATATGCTCTCATCAGACACATTGTCAAGGATCCTGTTAAATATCCTGATCGCATGAGTCCAAATTTCAAAAGCTTTTTAAAGGGTTTGCTTAACAAGGCACCGGAAAGTCGTCTAACTTGGCCGGCTCTTCTTGAGCATCCATTTGTTAAGGAAACCTCTGATGAACATGAGGCCAGGGAATTGCGAGAGATAAATGGTTCACGCATGCGCAGTGAAGCTGAACGGATGGTTGAAGGGAAAACCATTCAAACTCCAACAGGTATGGAGGGGCATATTGCTTCACCGCTTCAGAGTGAAGCTCAGTTAAATGGTCATAATATAGACAGAACTAACTCTTCAGTGCTTGATGATTCCCCGGGATTTTCAAATCAAAATATCGGAGAGTCAGGCTGCCAAAGATTGGACAGACTTGAAAATAACTCTCGCACAGTCAAAAGTGCAAAAATAATTGGTCAAGATAATGAAGCGTTGGGACATATTCTGCTACCACTGAAGAAATGGTCAAAAGGATCTCAAAATATTTGCAGTGATCAAGATGTTCCTCAATCAAATCAGTCATTGAGGATTCTCTCAAACCTAGTTGCAGCTGGTGCCTTCAATTCTAGTGGACGAATAGATGAATTAATAAGAGAGCTTCTTGTGTTTACTGGATCCATTATTGCCATTAAGTCCTCTGAAGTTACTGACATGATAGCAAAGGGTTTCTCTATCACTAAGATTTTGCTAGATAACGGCGGAAGTTGCTCTTCAAGCTCTTATCTAAGTCACTGGGTTGAATTTGTTGAGATCTATTCTCAGGTTGTAGCATCAAATAATGATGCATCTGGAAGAGTTCTCTATGAATCCAGTGCTTGCATTACAGTCATGCTGTCTAGAGTTGCTCAGGTGCTCAAGTCATCTCAAATTTCAGGCCAAGAGACATCGAATGAAACAGCTAACAGAATTTTAGACCACGCAAAAACAATGGGTTTAGTGGACCATCTATGTTTGTGTTTAGCCACATCTGGATCGAGTCTTATTTCAGGTTCTTCCAACATGCTAAGGGCTGCTTCTGAAGCATGCAGAGCTATCTGGTCTTTGATTAATGCACTGGATATTCTTTTTATGAAAAAAAGTGCCATTTTGTTTCCCATTAATGCGTTGCGCAGTCATTCTTTGCATAGGATGGAAGTTGTGCAACATGAGCAAAATCTCTTTGACAAAGCAGATTCAACAAAAATTGTTGATGCAATGACAAGAGCATTTCTTAGATCTAAAGCTGTCCAGGTTGCTGTTTACTATTGTTTTCACCAACGACTTGAGTCAGCAATGAATTGTTGTCTTCAGCTTTTGTCAAGGTGCTGCCTACACAATGAAATTGTTCCAGCTCTCCTTTGTGGTCTTCCCAGTTCCCTTCCGGTGACTACTGTTGTTAGTGGGGGTGGTGATGGAACTATTGTTTCAGAAGTTTTCACTGTTTTATCATTATGCAGTTCTTCTGTTAACAAAGACGCTCAGAGTATAGAACCAAGTAATGTAAAGTTCAAATTAACAAATCCTTCTGCTCTGGTTCGTCATTCATGTCTTGTTCTCGCAATAATTGCTCAGTGTTTGAAGTCAACTGGAAGAAATTCAGCAATGTTTATGCTCACTACCGCACCAAAGAAGCAGCTTGCTCGACTTTCAGTGCTTTCAAATCATATTACTTCTGATGATAAAATAAAAGCCTCCATCGAACCTCAAAGTGCATCAGCCATGTTAGCTTTGGCATCCATTCTGTCTCTCGAATCTGGGGCTTTAGTTGAGTCTCAAATATCTGAAATTGCATTGCCTTTAATTCCTCGAACCTCTACACTAAGTGATCTTCTTAAATTTTCATCTGGCAATGAAAACGAATTGGACCCTTGCAACTTCAGTGGGAAACTCTCATATTGGCAAGGGGTAAGAGATGGGTATGTTGGTCTTTTAGATTCCAGACTCAAGTTGGGAGGACCATTGGCTGTTCAGCAGTTGTGTGCAAGTGGCATTCCTCTACTTCTTATGGGCTTATTAGGCAATGATGTTTTAAACGCATCTCATGGAACTGAACATCAAAATGATAGAGTTGGATTGTCTCCTATTGGTGTTGTATGGACAATTTCATTATTATGTCATTGTCTTTCTGGAGGTGCTTTGATATATCGTCAAATTTTGATTAGGAATGAACATATTAAGCTCATTTCTAACTTGATATGTGATGTTCATATCAAGTTAGTGAAATGCTGGATCGGACCTGGTGGAGGGAAAGCAGGAGTCAGAGATCTAATAAATGCTGTGATAGATATCTTAGCATTTCCTTTTGTTGCTCTTCAAAATGCACCTGGCTTGCCTTCAGCCACTGCTTCTGTCAGCAGTGGGTTTCTTCTTAATATGGGCTCCCCTGGTCAGAGAATATGCATGGAAGATAAGGGTATAGTTAAGGCAATTGAAGAAGACATGGGGAAATATATTAAGATACTTGTGGAGGTTGGTGTGCCTAGTATTATACTTCGCTGTGTAGATCATATGGATTTGAATGATTTGGGTAGGCCTGTCGCATTTCTGGCTAAGATGGTCTGTCACCGTCCTTTGGCAATCCAACTCGTGAGTAAAGGCCTTTTGGATCCAAATAGGATGAGAAAGTTGTTTGACTGTTCGGGCCCAAAAGAAGTCACACTTGATGCTCTTATGATTATTTCTGATCTGGCTCGCATGGACAAGGCATTCTATGAGTACATTAAAGGTGCTACTATTTTGGAGTTCTTGAAAGATTTTCTTTCGCACGAGGATCCCAATGTGCGTGCCAAAGCCTGCAGTGCTCTTGGAAACATGTGTCGTCATAGCGCCTATTTTTATAGTTCACTTGCTAGACATCAAATTGTTGGTATCCTTATCGAAAGATGCTCTGATCCAGACAAACGAACACGAAAGTTTGCTTGTTTTGCTATTGGAAATGCGGCTTACCACAATGACTTGTTGTATGAAGAGCTGAGGAGATCGATTCCTCATTTAGCAAATTTGTTACAAATGGCTGAGGAAGATAAGACTAAGGCAAATGCAGCAGGAGCACTTAGCAATCTGGTTCGCAACTCTGACAAGCTTTGTGAAGACATCGTAGCTAAAGGAGCGGTTCAGTCTCTGCTGAAATTAATTTCCGATTGTGCGGTATCAGCCCTAAATCCAGGCAGAAATGATTCAGGAAACGAATCTCCACTTAAGATCGCTCTATTTTCACTGGCAAAGATGTGTGCACATCCACTCTGTAGACAGTTCATCCGTTCATCACCTTTGTTCCCTGTGATTGGAAGGCTTCAGCAGTCTCCAGAATCATCCATAGCCAAATATGCCTCCGTCATCATTGGTAAAGTTGCTGAACCTTGA 3999 0.4104 MGVENYHVIELVGEGSFGKVYKGRRKHTGQTVAMKFIMKHGKTEKDIHNLRQEIEILRKLKHGNIIQMLDSFESPQEFCVVTEFAQGELFEILEDDKCLPEDQVQAIAKQLVKALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSTNTVVLRSIKGTPLYMAPELVREQPYNHTVDLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDRMSPNFKSFLKGLLNKAPESRLTWPALLEHPFVKETSDEHEARELREINGSRMRSEAERMVEGKTIQTPTGMEGHIASPLQSEAQLNGHNIDRTNSSVLDDSPGFSNQNIGESGCQRLDRLENNSRTVKSAKIIGQDNEALGHILLPLKKWSKGSQNICSDQDVPQSNQSLRILSNLVAAGAFNSSGRIDELIRELLVFTGSIIAIKSSEVTDMIAKGFSITKILLDNGGSCSSSSYLSHWVEFVEIYSQVVASNNDASGRVLYESSACITVMLSRVAQVLKSSQISGQETSNETANRILDHAKTMGLVDHLCLCLATSGSSLISGSSNMLRAASEACRAIWSLINALDILFMKKSAILFPINALRSHSLHRMEVVQHEQNLFDKADSTKIVDAMTRAFLRSKAVQVAVYYCFHQRLESAMNCCLQLLSRCCLHNEIVPALLCGLPSSLPVTTVVSGGGDGTIVSEVFTVLSLCSSSVNKDAQSIEPSNVKFKLTNPSALVRHSCLVLAIIAQCLKSTGRNSAMFMLTTAPKKQLARLSVLSNHITSDDKIKASIEPQSASAMLALASILSLESGALVESQISEIALPLIPRTSTLSDLLKFSSGNENELDPCNFSGKLSYWQGVRDGYVGLLDSRLKLGGPLAVQQLCASGIPLLLMGLLGNDVLNASHGTEHQNDRVGLSPIGVVWTISLLCHCLSGGALIYRQILIRNEHIKLISNLICDVHIKLVKCWIGPGGGKAGVRDLINAVIDILAFPFVALQNAPGLPSATASVSSGFLLNMGSPGQRICMEDKGIVKAIEEDMGKYIKILVEVGVPSIILRCVDHMDLNDLGRPVAFLAKMVCHRPLAIQLVSKGLLDPNRMRKLFDCSGPKEVTLDALMIISDLARMDKAFYEYIKGATILEFLKDFLSHEDPNVRAKACSALGNMCRHSAYFYSSLARHQIVGILIERCSDPDKRTRKFACFAIGNAAYHNDLLYEELRRSIPHLANLLQMAEEDKTKANAAGALSNLVRNSDKLCEDIVAKGAVQSLLKLISDCAVSALNPGRNDSGNESPLKIALFSLAKMCAHPLCRQFIRSSPLFPVIGRLQQSPESSIAKYASVIIGKVAEP 1332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00606 1332 ProSiteProfiles Protein kinase domain profile. 6 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g00606 1332 MobiDBLite consensus disorder prediction 314 336 - -
Viun7g00606 1332 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
Viun7g00606 1332 SUPERFAMILY Protein kinase-like (PK-like) 4 270 IPR011009 -
Viun7g00606 1332 Gene3D Transferase(Phosphotransferase) domain 1 2 312 - -
Viun7g00606 1332 Pfam HEAT repeats 1126 1230 - -
Viun7g00606 1332 FunFam Aurora kinase A 1 88 - -
Viun7g00606 1332 ProSitePatterns Protein kinases ATP-binding region signature. 12 39 IPR017441 GO:0005524
Viun7g00606 1332 FunFam Serine/threonine-protein kinase 36 3 318 - -
Viun7g00606 1332 Coils Coil 40 60 - -
Viun7g00606 1332 FunFam Serine/threonine-protein kinase TIO 1059 1328 - -
Viun7g00606 1332 Gene3D - 1057 1328 IPR011989 -
Viun7g00606 1332 SMART arm_5 1196 1235 IPR000225 GO:0005515
Viun7g00606 1332 SMART arm_5 1112 1152 IPR000225 GO:0005515
Viun7g00606 1332 SMART arm_5 1236 1290 IPR000225 GO:0005515
Viun7g00606 1332 SMART arm_5 519 569 IPR000225 GO:0005515
Viun7g00606 1332 CDD STKc_STK36 4 256 - -
Viun7g00606 1332 SUPERFAMILY ARM repeat 1025 1329 IPR016024 -
Viun7g00606 1332 SMART serkin_6 6 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g00606 1332 Coils Coil 1200 1220 - -
Viun7g00606 1332 Pfam Protein kinase domain 6 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g00606 1332 PANTHER PROTEIN KINASE RELATED 3 1329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00606 Viun-Chr7 4726619 4739362 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00606 1 245 AGC Kinase Gene Family AT3G08720 39.271 3.67e-47 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK ULK_Fused Viun7g00606 Pkinase 5.3e-78 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00606 K06228 - gmx:100792102 2352.01