Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00592 ATGGAAGAGTGGAAGAGATTAGGAGTTTTAGGAGAAGGTTCATATGCTATAGTGTATCTTGTTGTTGTGATTTCTCAGAAAGAACATACTTCGAATGTTGTAGCTGTGAAATCTTCAAAGCCTTGTTGCTATGTTTCACTCCAAAAGGAGCAAAGGATATTGGAGTTATTCAAAGGTTGTGAAGAAATTCTTCAATGTTATTTCTATCAAGAGACTATTGAGAATGGTCGTAGGACCTACAATCTCTTCATGGAATATACTCCTTGTGGTACTCTTGGTGATTTAATAAAAAAAGGGTCGCTGTCAGAGAAGGAAGTGATAACGTACACTCGGATGCTTCTCAAGGGACTTCGCTCTATTCATAAAGAAGGAATTATTCATTGTGATCTCAAACCGGCCAACATTCTTCTCTTTCCTTCATCCGATGATAATGCAAAGTATCAACTAAAGATCGCTGATTTTGGATTGTCCAACACTATAGGAGATGCAAATGTTGGTCTAGGAGAGATCATGTTCAGAGGTACACATATTTACATGTCACCAGAATCAATTATAGGTTTGATGGGAACCGCGTTAGATATATGGTCTCTTGGATGCATTGTTATTGAGATGATGACTGGATTTCCGCCATGGACTAACATACAAAGCATCGAAGAGCTAATGTGGAAGCTTGGACTCCTTCAAGAAGTACCAAAGATACCTGATGAACTTAACTGGGATTGCAAAAACTTCCTCAGTAAGTGCTTTGCAAAGGATCATAGAGAGAGGTGGAGTGCTGCAATGCTTCTTGATCATCCTTTCATTCAAAAGGAATATCCAACCTCTTCTATGTTTAATCCCTCATCTTTTTTCTCATATGATATTGTCATCTAG 873 0.3826 MEEWKRLGVLGEGSYAIVYLVVVISQKEHTSNVVAVKSSKPCCYVSLQKEQRILELFKGCEEILQCYFYQETIENGRRTYNLFMEYTPCGTLGDLIKKGSLSEKEVITYTRMLLKGLRSIHKEGIIHCDLKPANILLFPSSDDNAKYQLKIADFGLSNTIGDANVGLGEIMFRGTHIYMSPESIIGLMGTALDIWSLGCIVIEMMTGFPPWTNIQSIEELMWKLGLLQEVPKIPDELNWDCKNFLSKCFAKDHRERWSAAMLLDHPFIQKEYPTSSMFNPSSFFSYDIVI 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00592 290 SUPERFAMILY Protein kinase-like (PK-like) 2 282 IPR011009 -
Viun7g00592 290 ProSiteProfiles Protein kinase domain profile. 4 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g00592 290 Pfam Protein kinase domain 6 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g00592 290 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 4 270 - -
Viun7g00592 290 SMART serkin_6 4 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g00592 290 Gene3D Transferase(Phosphotransferase) domain 1 1 285 - -
Viun7g00592 290 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Viun7g00592 290 CDD STKc_MAPKKK 3 268 - -
Viun7g00592 290 ProSitePatterns Protein kinases ATP-binding region signature. 10 37 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00592 Viun-Chr7 4649278 4650272 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00592 3 289 MAP Kinase Kinase Kinase AT4G36950 39.016 1.93e-62 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Viun7g00592 Pkinase 2.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00592 - - gmx:102660670 362.844