Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00587 ATGATGTCTCAGTCATTTGTTATGCTTGCAGCATCACTGTTATTTGTTATAGCACAAGGTGTTGTGGGAGTGAACTCAGGTTCACAAGCTGATAAGATAAGCACTTTGCCAGGGCAGCCACCAGTCAAATTCCAGCAATATGCAGGTTACATTACAGTGGATGAGAAGCAGAAGAGAGCTTTGTTTTACTACTTTGTTGAAGCAGAAGTGGAACCAGCTTCAAAGCCATTAGTTCTATGGTTAAATGGAGGGCCTGGTTGTTCTTCTGTTGGAGCTGGAGCTTTTGTTGAGCATGGCCCTTTCAAACCAAGTGAAAATGGACTTTTGAAAAATGAATTTAGCTGGAACAAAGAGGCAAATGTTCTGTACTTGGAATCACCAGCTGGTGTTGGTTTCTCCTACTCTGCTAACTATTCTTTCTATGACTATGTGAATGATGAAATGACAGCAAGGGACAATCTTGTTTTCCTGCAGCGTTGGTTCACTAAGTTCCCAGAGTTCAAAAACAATGATTTCTTTATCACAGGAGAAAGCTATGCAGGTCACTATGCACCCCAACTTGCACAACTCATTGTTAAAACCAAAACCAAGTTCAATCTCAAGGGAATAGCAATAGGGAATCCTCTTCTGGAATTTAACACGGATTTCAACTCTAGAGCTGAGTTTTTCTGGTCCCATGGCCTAATATCAGATTCAACTTACGAAATCTTCACCAAAGTATGCAACTATTCCCAAATTAGGAGACAACATCAAAGTGGGACACTTACCCCCATTTGTTCAGGGGTAAATAGGCTGGTGTCAACAGAAGTTAGTAGATACATTGATACATATGATGTTACACTTGATGTGTGTCTTTCATCAGTAGATCAACAGGCTTATGTGCTGAATCAAATGACTCAACTGCAAGAGGGAGCAAAGATAGATGTTTGTGTGGAAGATGAAACTACTGCTTATTTGAATAGGAAAGACGTGCAAGAAGCTCTTCATGCTAAGCTGGTAGGGATCACTTCATGGTCAGTTTGCAGCGATATTCTTAAATATGACATGCAGAATCTAGAGATTCCAACTATTTCTATTCTAGGTGCACTTGCTAAGTCTGGTATCAGGGTTCTGGTATACAGTGGAGATCAAGATTCAGTGATCCCATTAATTGGTACAAGATCACTGGTAAATGGATTGGCCAAGAACTTTGGACTTAACACAACAGTGTCATACAGAACCTGGTTTGAGGGAAGACAGGTGGCTGGTTGGACACAAGTATATGGAGACATCTTATCATTTGCCACTGTAAGAGGAGCTGCTCATGAAGCTCCATTTTCCCAGCCAGAGAGATCACTGGTGCTACTCAAAGCATTTTTGGAAGGAAAACCACTTCCACAACCATTCTTTCAAATATGA 1398 0.4092 MMSQSFVMLAASLLFVIAQGVVGVNSGSQADKISTLPGQPPVKFQQYAGYITVDEKQKRALFYYFVEAEVEPASKPLVLWLNGGPGCSSVGAGAFVEHGPFKPSENGLLKNEFSWNKEANVLYLESPAGVGFSYSANYSFYDYVNDEMTARDNLVFLQRWFTKFPEFKNNDFFITGESYAGHYAPQLAQLIVKTKTKFNLKGIAIGNPLLEFNTDFNSRAEFFWSHGLISDSTYEIFTKVCNYSQIRRQHQSGTLTPICSGVNRLVSTEVSRYIDTYDVTLDVCLSSVDQQAYVLNQMTQLQEGAKIDVCVEDETTAYLNRKDVQEALHAKLVGITSWSVCSDILKYDMQNLEIPTISILGALAKSGIRVLVYSGDQDSVIPLIGTRSLVNGLAKNFGLNTTVSYRTWFEGRQVAGWTQVYGDILSFATVRGAAHEAPFSQPERSLVLLKAFLEGKPLPQPFFQI 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00587 465 FunFam Carboxypeptidase 356 455 - -
Viun7g00587 465 SUPERFAMILY alpha/beta-Hydrolases 35 459 IPR029058 -
Viun7g00587 465 Gene3D - 310 345 - -
Viun7g00587 465 ProSitePatterns Serine carboxypeptidases, serine active site. 174 181 IPR018202 GO:0004185
Viun7g00587 465 Pfam Serine carboxypeptidase 37 455 IPR001563 GO:0004185|GO:0006508
Viun7g00587 465 FunFam Carboxypeptidase 26 459 - -
Viun7g00587 465 Gene3D - 357 455 - -
Viun7g00587 465 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 32 442 IPR001563 GO:0004185|GO:0006508
Viun7g00587 465 Gene3D alpha/beta hydrolase 27 285 IPR029058 -
Viun7g00587 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 185 IPR001563 GO:0004185|GO:0006508
Viun7g00587 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 111 123 IPR001563 GO:0004185|GO:0006508
Viun7g00587 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 425 438 IPR001563 GO:0004185|GO:0006508
Viun7g00587 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 134 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00587 Viun-Chr7 4561675 4565142 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00587 318 458 Calmodulin-binding Proteins AT2G22960 29.078 2.32e-16 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00587 K16297 - gmx:100805028 875.544