Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00586 ATGGCATCAAGCTCAATTTCAGCTACAGGATCATGGAGTGCTAAGGACAACAAGGCCTTTGAAAGGGCTCTAGCTGTTTATGACAAGGACACCCCTGACCGATGGAACAATGTTGCCCTTGCTGTTGGAGGGAAAACTCCTGATGAAGTGAAAAGGCACTATGAGCTTCTCCTCAGAGACATTTCTCAGATTGAATCAGGTCAAGTTCCATTCCCAAACTACAAGAAAACTGCTGAGTTTGATGAAGAGGGGAAAAGGCTGAAAAACATGGAGCTCCAGTGA 282 0.4539 MASSSISATGSWSAKDNKAFERALAVYDKDTPDRWNNVALAVGGKTPDEVKRHYELLLRDISQIESGQVPFPNYKKTAEFDEEGKRLKNMELQ 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00586 93 Pfam Myb-like DNA-binding domain 9 55 IPR001005 -
Viun7g00586 93 SUPERFAMILY Homeodomain-like 11 65 IPR009057 -
Viun7g00586 93 CDD SANT 11 58 IPR001005 -
Viun7g00586 93 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 82 IPR044636 GO:0003700
Viun7g00586 93 ProSiteProfiles Myb-like domain profile. 10 58 IPR001005 -
Viun7g00586 93 SMART sant 8 60 IPR001005 -
Viun7g00586 93 FunFam Transcription factor SRM1 4 71 - -
Viun7g00586 93 Gene3D - 2 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00586 Viun-Chr7 4551907 4552853 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Viun7g00586 Myb_DNA-binding 8e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00586 - - gmx:100777923 161.77