Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00585 ATGAAGAACTCTGGTTTGGATAGTGGAATGTTCATTGACAGTGATGAAGATGTGGAGAATGAACATCATAAGTATTTGAATGATGGAAACGAATCGGATTATTCGAATTATTCCATTGATAACCATTCAAGGAAACCAAGCAACTACAATATGGCATGGCCTCAAAGTTACAGGCAATCCATTGATCTATATGGTAGTGTACCATCACCAAATATTGGATTTCTGGGGACCACATCCCTGTCAAGATTAGGAAGCTCTTTTCTTGTTTCATCTTTGACAAGGAGGCAAACTCTTGAAATAACGCAACCAGAGAAAAAACCACTCTTGCAACCCAAAGAAGAGGAGCAACTGCGACATTCCTTGCTTCCTCCACAGCTATCTAGAAAGTCTTCCATTAGGAAAGATGCTTCCAAGGTTTCTCATGAAGTTCACATACCTGGCCAATGCACTTTTGGACAAGCTGTGCTTAATGGCATAAATGCCCTTTGTGGAATAGGAATCCTTTCAACCCCATATGCTGTTAAAGAAGGTGGATGGGTTGGTCTTTCTATATTGTTACTGTATGCAATTTTTTCCTATTATACTGGTTTGCTTCTGCGTTACTGTTTAGATAGTTCACCTGGTCTTGAGACATACCCTGACATTGGCCAAGCAGCTTTTGGTACTACTGGACGTGTCATTATTTCTTTAATATTGTACATGGAACTATATGCTTGTTGCATTGAGTACATAATTGTGGAGAGTGACAACTTATCGACATTATTTCCAAATGCACACATTACTTTGGGTGGAATTGAAGTGAATGCACACATATTGTTTGCAATATTGACAGCATTGGCTCTTCTTCCTACTGTTTGGCTTCGTGATCTACGTATTCTCAGTTACATCTCAGCTTGTGGAGTTGTTGCAACATTTCTAGTGGTTGCATGCTTGATCTGGGTTTGCTTGGTAGACAAAGCTTCCATTGATCATAGCCAAGGAACAACAACATTGAATCTTACAACTTTTCCTGTTGCAATGGGTCTCTATGGTTACTGCTACGCAGGACATGCTGTGTTTCCAAATCTCTACACTGCCATGGCAAATCGGAATCAATTTCCTGGAGTGCTCTTAGTATGTTTTGCTATTTGTACAAGTCTGTATTGTGCAGTAGCTGTTGTTGGTTACTCAGCATTTGGAGAAGGAGTACACTCTCAGTTCACTCTTAACATGCCCCAACACTTAGTAGCTGCCAAGATAGCTGTGTGGACTACGGTGGTCAATCCATTTACCAAATATGCATTAAGTCTATCTCCAGTAGCAATGTGTATAGAGGAGTTGATACCACCAACCCATCCCCACTTCAACATATATTCCAAGGTCATTAGAACAGCTCTTGTACTTTCTACACTGGTTGTTGGTCTTTCAGTTCCCTTTTTTGGTTTGGTAATGTCATTAACTGGATCTTTACTCACTATGTTTGTTTCATTGATTCTTCCTGCTGCTTGTTTTCTAAGCATAAGGGGTGGCAGAATCTCAAGCTTTCAGGCAGCACTTTGTGTTACAATTATTATTGTAGGTGCTGTATCAAGCTGTTTTGGATCATACTCATCCCTCTATGAGATCATTGAGAAATTGTTTGGATAA 1626 0.3991 MKNSGLDSGMFIDSDEDVENEHHKYLNDGNESDYSNYSIDNHSRKPSNYNMAWPQSYRQSIDLYGSVPSPNIGFLGTTSLSRLGSSFLVSSLTRRQTLEITQPEKKPLLQPKEEEQLRHSLLPPQLSRKSSIRKDASKVSHEVHIPGQCTFGQAVLNGINALCGIGILSTPYAVKEGGWVGLSILLLYAIFSYYTGLLLRYCLDSSPGLETYPDIGQAAFGTTGRVIISLILYMELYACCIEYIIVESDNLSTLFPNAHITLGGIEVNAHILFAILTALALLPTVWLRDLRILSYISACGVVATFLVVACLIWVCLVDKASIDHSQGTTTLNLTTFPVAMGLYGYCYAGHAVFPNLYTAMANRNQFPGVLLVCFAICTSLYCAVAVVGYSAFGEGVHSQFTLNMPQHLVAAKIAVWTTVVNPFTKYALSLSPVAMCIEELIPPTHPHFNIYSKVIRTALVLSTLVVGLSVPFFGLVMSLTGSLLTMFVSLILPAACFLSIRGGRISSFQAALCVTIIIVGAVSSCFGSYSSLYEIIEKLFG 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00585 541 PANTHER OS05G0424000 PROTEIN-RELATED 157 523 - -
Viun7g00585 541 FunFam Amino acid transporter AVT1A 147 538 - -
Viun7g00585 541 Pfam Transmembrane amino acid transporter protein 149 529 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00585 Viun-Chr7 4543681 4551413 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00585 7 474 Amino Acid or Auxin Permease AAAP Family AT2G39130 60.752 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00585 K15015 - gmx:100798108 869.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g00585 7 4543681 4551413 Viun7g00585 7 4543681 4551413 ECH