Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00567 ATGCCTGCCAGAACTCTAAACTGCGAAGCATGTTGTGAGGGGTTCTTCTGTCCTCATGGAATCACATGCATGATACCTTGCCCTCTAGGATCTTATTGCCCTAGTGCTGTACTCAATAACTCAACTGGTGTTTGTGAACCATATCTTTACCAACTGCCTCCAATGCAGCCAAATCATACCTGTGGAGGAGCAAATATTTGGGCTGATATTAGTAGCAGTAGTGAGATATTTTGTTCGGCAGGATCATATTGCTCTACCATTACAAAAAGAATTCCTTGTAGTAGTGGGCATTACTGTAGGATGGGTGCCACATCTGAGCAAAGGTGCTTCAAGTTGAGTTCATGTGATTCAAACACCGTGACCCAAAATATTCAAGCCTATGGAATCATGCTCATTGCTGCTTTGAGTACTTTGTTACTCATTATATACAGCTGTTCTGACCAAGTTCTGACTACCAGAGAAAGGAGAATGGCAAAGTCCAGAGAAGCAGCAGCCAGAAGTGTAAGAAATACTGCAAATGCTCGCCAAAGATGGAAAGATGCAAAAGATGCTGCTAAGAAGAGTGCAAGTGGACTGCAAGCTCAACTATCACGAACATTTACTCGGAAAAAGGACATAGATCCGGAAGAAATTAGAATTTTGAACCAACCAACTACTGAAACAAAGATAGAATTGTTTTCACATTCACATCCTATTACCTCACCTATGATCGGTAGCTCATATGCTGGGCCAAAGAGAAAGGGAAAAGAAGCTGGTGATTTGATGCAGATAATGAATCAAGTGGAAAATGATGCAAATACTAGTAGCAACATTCTTGCAGAAACAGAAACTCGAGCAAAAAATGTTACAGCAAGAGTGCCCAAGGAAAAACAACTGAATACACATAGCCAAATTTTTAAGTATGCATACGCTCAACTTGAGAAAGAAAAGGCTCAGCAAGAAGAAAACAAGAACCTTACCTTTTCAGGAGTAATTAGTATGGTTACCAAAAGTGAACAAAGGAAAAGGCCTTTGATTGAAATATCTTTCAAAGATCTGACTCTTACTTTGAAAGCACACAATAAACTTATATTGAGATGTGTCACGGGGAAGATTAAACCTGGACGCATCACTGCCGTCATGGGTCCATCAGGTGCTGGCAAGACAACTTTTCTTTCTGCAATAGCTGGGAAGGCATTTGGATGCAAGGTGACTGGTTCGATTTTTGTAAATGAAAAGAATGAATCAATCCACTCATATAAGAAAATTATAGGCTTTGTGCCACAAGATGATATAGTTCATGGAAACCTGACTGTGGAAGAAAACTTTAGGTTCAGTGCACTGTGCAGGCTACCTGCTGACTTGCCAAAACCAGAAAAAGTTCTGATTGTTGAAAGAGTTATTGAATTCTTGGGGCTTCAATCTGTGCGGAATTCTTTGGTTGGAACTGTAGAAAAGCGAGGAATCTCTGGAGGCCAAAGGAAACGTGTAAATGTTGGATTGGAAATGGTCATGGAACCTTCACTCATGATCTTGGATGAACCCACCTCTGGGTTGGACAGTGCATCATCTCAACTCCTTCTTAGAGCACTAAGACGGGAAGCTCTAGAAGGAGTGAACATTTGCATGGTGGTTCACCAACCCAGCTACGCGTTGTTTAATATGTTCGATGACTTGATACTCCTGGCAAAAGGTGGCCTCACTGTATATCATGGATCAGTCAAGAAAGTTGAAGAATACTTTGCAGACCTTGGGATAAATATACCAAAACGAATTAATCCTCCTGATTACTTCATTGACATTCTGGAAGGCATAGCAGTACCTAGTGGAAGTTCAGAAGTCAGTTATAAAGAGCTGCCACTTAGATGGATGCTTCATAATGGATACCCAGTACCTCCTGATATGCAGCAGAATGCAGCACAACTTGGTATGTTTGAAACTGCAAACCCAGCTAGAGAAAAAGATCCCGATGGCTCTAGCCATGAAGAAAGAAGCTTTGTTGGAGAATTATGGCATGATGTGAGAAATGTTATGGAACTAAAGGGGGAAAAAATAAGACTAAATTTTTTTAAATCGAAGGATTTATCTGAACGTAAAACTCCTGGTATATTCAAGCAGTACAAGTACTTCCTCATACGGGTTGGTAAACAAAGATTACGAGAATCTAAGATCCAAGCTATAGATTATTTAATATTATTACTCGCTGGAGCCTGCTTAGGATCACTTACTAAAGCTAGCGATCAGACCTTTGGTGCAGCTGGATACACCTATACCGTGATTGCTGTATCTCTTTTATGCAAAATATCTGCCCTGAGATCCTTTTCTCTAGACAAATTACACTACTGGAGGGAGAGTGATTCTGGCATGAGCAGCTTGGCGTATTTCCTCTCCAAAGACACAATCGATCATTTCAATACAGTGATCAAACCTGTGGTTTACCTGTCAATGTTCTACTTTTTTACCTATCCAAGATCAACTTTTGCAGATAATTACATTGTGCTGCTTTGTCTTGTATATTGTGTGACTGGCATAGCATATGCATTTGCCATACTCTTTGAACCCGGTGCAGCCCAGCTATGGTCGGTACTTCTTCCAGTTGTTTTTACTCTCATTGCTACACAGCCAAAAGATAGTAAATTTTTGAAGGATATAGCTTATTTTTGCTACCCTAGGTGGGCTTTAGAAGCGTTCATAATTGCAAATGCTGAAAGGTATCACGGGGTGTGGCTCTTAACTCGTTGTGGTTCACTACTGAAAAGTGGGTATAATCTTCATGATTGGGGTTTGTGCATATCTATCCTCATTCTCATGGGTGTAATTGCTCGGACAGTAGCATTTTTCTGTATGCTCACCTTTCTAAAGAAATAA 2847 0.4046 MPARTLNCEACCEGFFCPHGITCMIPCPLGSYCPSAVLNNSTGVCEPYLYQLPPMQPNHTCGGANIWADISSSSEIFCSAGSYCSTITKRIPCSSGHYCRMGATSEQRCFKLSSCDSNTVTQNIQAYGIMLIAALSTLLLIIYSCSDQVLTTRERRMAKSREAAARSVRNTANARQRWKDAKDAAKKSASGLQAQLSRTFTRKKDIDPEEIRILNQPTTETKIELFSHSHPITSPMIGSSYAGPKRKGKEAGDLMQIMNQVENDANTSSNILAETETRAKNVTARVPKEKQLNTHSQIFKYAYAQLEKEKAQQEENKNLTFSGVISMVTKSEQRKRPLIEISFKDLTLTLKAHNKLILRCVTGKIKPGRITAVMGPSGAGKTTFLSAIAGKAFGCKVTGSIFVNEKNESIHSYKKIIGFVPQDDIVHGNLTVEENFRFSALCRLPADLPKPEKVLIVERVIEFLGLQSVRNSLVGTVEKRGISGGQRKRVNVGLEMVMEPSLMILDEPTSGLDSASSQLLLRALRREALEGVNICMVVHQPSYALFNMFDDLILLAKGGLTVYHGSVKKVEEYFADLGINIPKRINPPDYFIDILEGIAVPSGSSEVSYKELPLRWMLHNGYPVPPDMQQNAAQLGMFETANPAREKDPDGSSHEERSFVGELWHDVRNVMELKGEKIRLNFFKSKDLSERKTPGIFKQYKYFLIRVGKQRLRESKIQAIDYLILLLAGACLGSLTKASDQTFGAAGYTYTVIAVSLLCKISALRSFSLDKLHYWRESDSGMSSLAYFLSKDTIDHFNTVIKPVVYLSMFYFFTYPRSTFADNYIVLLCLVYCVTGIAYAFAILFEPGAAQLWSVLLPVVFTLIATQPKDSKFLKDIAYFCYPRWALEAFIIANAERYHGVWLLTRCGSLLKSGYNLHDWGLCISILILMGVIARTVAFFCMLTFLKK 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00567 948 FunFam ABC transporter G family member 24 335 577 - -
Viun7g00567 948 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 341 582 IPR003439 GO:0005524
Viun7g00567 948 ProSitePatterns ABC transporters family signature. 482 496 IPR017871 GO:0005524|GO:0016887
Viun7g00567 948 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 341 574 IPR027417 -
Viun7g00567 948 Pfam ABC-2 type transporter 539 948 IPR043926 GO:0140359
Viun7g00567 948 Pfam ABC transporter 360 510 IPR003439 GO:0005524
Viun7g00567 948 Gene3D - 327 581 IPR027417 -
Viun7g00567 948 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 272 935 - -
Viun7g00567 948 MobiDBLite consensus disorder prediction 161 193 - -
Viun7g00567 948 SMART AAA_5 367 559 IPR003593 GO:0016887
Viun7g00567 948 CDD ABCG_EPDR 339 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00567 Viun-Chr7 4379155 4390157 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00567 365 571 Calmodulin-binding Proteins AT2G36910 26.549 6.30e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00567 - - gmx:100783798 1668.29