Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00566 ATGCTTCCGAATGCTTTGCCGGTACTTCGTTGCGTGCACCTCGTGGTGGCGGCGGCGGTGGCTTCGGTCCTGCTCCGCCGGATGCAGTGCCAGCAGCTAAGCGACTTCGATAACCCTGTGGTAATGCCACGTATCACCCGTCATGTGTATGATCAAATGTCCAACATGACTTCGCTCCTCAATCACGAAATCAAAGCTAGCTCCGGTTTCTGCGTCAAAGATCCGGATGCTGATTGGAATAAAGCATTTAATTTTTCTTCTGATTTGGACTTTGTGTCTACTTGCATTCGGAAGACTAAAGGAGATATTTTGCAACGGTTGTGTACAGCAGCAGAAATAAAGTTTTACTTAAATAGCTTATTGGAGAGGTCTAGCACTAGGAGTGCCAACTATTTGAAGCCTAACAGGAACTGCAATTTAAACTCATGGGTATCAGGTTGTGAGCCAGGATGGGCGTGTAGTGTTCCCACAAGCCAGCAAGTTGACCTTATAAATTCACAGGAGATGCCTGCCAGAACTCTAAACTGCGAAGCATGTTGTGAGGGGTTCTTCTGTCCTCATGGAATCACATGCATGATACCTTGCCCTCTAGGATCTTATTGCCCTAGTGCTGTACTCAATAACTCAACTGGTGTTTGTGAACCATATCTTTACCAACTGCCTCCAATGCAGCCAAATCATACCTGTGGAGGAGCAAATATTTGGGCTGATATTAGTAGCAGTAGTGAGATATTTTGTTCGGCAGGATCATATTGCTCTACCATTACAAAAAGAATTCCTTGTAGTAGTGGGCATTACTGTAGGATGGGTGCCACATCTGAGCAAAGGTGCTTCAAGTTGAGTTCATGTGATTCAAACACCGTGACCCAAAATATTCAAGCCTATGGAATCATGCTCATTGCTGCTTTGAGTACTTTGTTACTCATTATATACAGCTGTTCTGACCAAGTTCTGACTACCAGAGAAAGGAGAATGGCAAAGTCCAGAGAAGCAGCAGCCAGAAGTGTAAGAAATACTGCAAATGCTCGCCAAAGATGGAAAGATGCAAAAGATGCTGCTAAGAAGAGTGCAAGTGGACTGCAAGCTCAACTATCACGAACATTTACTCGGAAAAAGGACATAGATCCGGAAGAAATTAGAATTTTGAACCAACCAACTACTGAAACAAAGATAGAATTGTTTTCACATTCACATCCTATTACCTCACCTATGATCGGTAGCTCATATGCTGGGCCAAAGAGAAAGGGAAAAGAAGCTGGTGATTTGATGCAGATAATGAATCAAGTGGAAAATGATGCAAATACTAGTAGCAACATTCTTGCAGAAACAGAAACTCGAGCAAAAAATGTTACAGCAAGAGTGCCCAAGGAAAAACAACTGAATACACATAGCCAAATTTTTAAGTATGCATACGCTCAACTTGAGAAAGAAAAGGCTCAGCAAGAAGAAAACAAGAACCTTACCTTTTCAGGAGTAATTAGTATGGTTACCAAAAGTGAACAAAGGAAAAGGCCTTTGATTGAAATATCTTTCAAAGATCTGACTCTTACTTTGAAAGCACACAATAAACTTATATTGAGATGTGTCACGGGGAAGATTAAACCTGGACGCATCACTGCCGTCATGGGTCCATCAGGTGCTGGCAAGACAACTTTTCTTTCTGCAATAGCTGGGAAGGCATTTGGATGCAAGGTGACTGGTTCGATTTTTGTAAATGAAAAGAATGAATCAATCCACTCATATAAGAAAATTATAGGCTTTGTGCCACAAGATGATATAGTTCATGGAAACCTGACTGTGGAAGAAAACTTTAGGTTCAGTGCACTGTGCAGGCTACCTGCTGACTTGCCAAAACCAGAAAAAGTTCTGATTGTTGAAAGAGTTATTGAATTCTTGGGGCTTCAATCTGTGCGGAATTCTTTGGTTGGAACTGTAGAAAAGCGAGGAATCTCTGGAGGCCAAAGGAAACGTGTAAATGTTGGATTGGAAATGGTCATGGAACCTTCACTCATGATCTTGGATGAACCCACCTCTGGGTTGGACAGTGCATCATCTCAACTCCTTCTTAGAGCACTAAGACGGGAAGCTCTAGAAGGAGTGAACATTTGCATGGTGGTTCACCAACCCAGCTACGCGTTGTTTAATATGTTCGATGACTTGATACTCCTGGCAAAAGGTGGCCTCACTGTATATCATGGATCAGTCAAGAAAGTTGAAGAATACTTTGCAGACCTTGGGATAAATATACCAAAACGAATTAATCCTCCTGATTACTTCATTGACATTCTGGAAGGCATAGCAGTACCTAGTGGAAGTTCAGAAGTCAGTTATAAAGAGCTGCCACTTAGATGGATGCTTCATAATGGATACCCAGTACCTCCTGATATGCAGCAGAATGCAGCACAACTTGGTATGTTTGAAACTGCAAACCCAGCTAGAGAAAAAGATCCCGATGGCTCTAGCCATGAAGAAAGAAGCTTTGTTGGAGAATTATGGCATGATGTGAGAAATGTTATGGAACTAAAGGGGGAAAAAATAAGACTAAATTTTTTTAAATCGAAGGATTTATCTGAACGTAAAACTCCTGGTATATTCAAGCAGTACAAGTACTTCCTCATACGGGTTGGTAAACAAAGATTACGAGAATCTAAGATCCAAGCTATAGATTATTTAATATTATTACTCGCTGGAGCCTGCTTAGGATCACTTACTAAAGCTAGCGATCAGACCTTTGGTGCAGCTGGATACACCTATACCGTGATTGCTGTATCTCTTTTATGCAAAATATCTGCCCTGAGATCCTTTTCTCTAGACAAATTACACTACTGGAGGGAGAGTGATTCTGGCATGAGCAGCTTGGCGTATTTCCTCTCCAAAGACACAATCGATCATTTCAATACAGTGATCAAACCTGTGGTTTACCTGTCAATGTTCTACTTTTTTACCTATCCAAGATCAACTTTTGCAGATAATTACATTGTGCTGCTTTGTCTTGTATATTGTGTGACTGGCATAGCATATGCATTTGCCATACTCTTTGAACCCGGTGCAGCCCAGCTATGGTCGGTACTTCTTCCAGTTGTTTTTACTCTCATTGCTACACAGCCAAAAGATAGTAAATTTTTGAAGGATATAGCTTATTTTTGCTACCCTAGGTGGGCTTTAGAAGCGTTCATAATTGCAAATGCTGAAAGGTATCACGGGGTGTGGCTCTTAACTCGTTGTGGTTCACTACTGAAAAGTGGGTATAATCTTCATGATTGGGGTTTGTGCATATCTATCCTCATTCTCATGGGTGTAATTGCTCGGACAGTAGCATTTTTCTGTATGCTCACCTTTCTAAAGAAATAA 3351 0.4142 MLPNALPVLRCVHLVVAAAVASVLLRRMQCQQLSDFDNPVVMPRITRHVYDQMSNMTSLLNHEIKASSGFCVKDPDADWNKAFNFSSDLDFVSTCIRKTKGDILQRLCTAAEIKFYLNSLLERSSTRSANYLKPNRNCNLNSWVSGCEPGWACSVPTSQQVDLINSQEMPARTLNCEACCEGFFCPHGITCMIPCPLGSYCPSAVLNNSTGVCEPYLYQLPPMQPNHTCGGANIWADISSSSEIFCSAGSYCSTITKRIPCSSGHYCRMGATSEQRCFKLSSCDSNTVTQNIQAYGIMLIAALSTLLLIIYSCSDQVLTTRERRMAKSREAAARSVRNTANARQRWKDAKDAAKKSASGLQAQLSRTFTRKKDIDPEEIRILNQPTTETKIELFSHSHPITSPMIGSSYAGPKRKGKEAGDLMQIMNQVENDANTSSNILAETETRAKNVTARVPKEKQLNTHSQIFKYAYAQLEKEKAQQEENKNLTFSGVISMVTKSEQRKRPLIEISFKDLTLTLKAHNKLILRCVTGKIKPGRITAVMGPSGAGKTTFLSAIAGKAFGCKVTGSIFVNEKNESIHSYKKIIGFVPQDDIVHGNLTVEENFRFSALCRLPADLPKPEKVLIVERVIEFLGLQSVRNSLVGTVEKRGISGGQRKRVNVGLEMVMEPSLMILDEPTSGLDSASSQLLLRALRREALEGVNICMVVHQPSYALFNMFDDLILLAKGGLTVYHGSVKKVEEYFADLGINIPKRINPPDYFIDILEGIAVPSGSSEVSYKELPLRWMLHNGYPVPPDMQQNAAQLGMFETANPAREKDPDGSSHEERSFVGELWHDVRNVMELKGEKIRLNFFKSKDLSERKTPGIFKQYKYFLIRVGKQRLRESKIQAIDYLILLLAGACLGSLTKASDQTFGAAGYTYTVIAVSLLCKISALRSFSLDKLHYWRESDSGMSSLAYFLSKDTIDHFNTVIKPVVYLSMFYFFTYPRSTFADNYIVLLCLVYCVTGIAYAFAILFEPGAAQLWSVLLPVVFTLIATQPKDSKFLKDIAYFCYPRWALEAFIIANAERYHGVWLLTRCGSLLKSGYNLHDWGLCISILILMGVIARTVAFFCMLTFLKK 1116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00566 1116 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 509 742 IPR027417 -
Viun7g00566 1116 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 509 750 IPR003439 GO:0005524
Viun7g00566 1116 Pfam ABC-2 type transporter 707 1116 IPR043926 GO:0140359
Viun7g00566 1116 ProSitePatterns ABC transporters family signature. 650 664 IPR017871 GO:0005524|GO:0016887
Viun7g00566 1116 Gene3D - 495 749 IPR027417 -
Viun7g00566 1116 SMART AAA_5 535 727 IPR003593 GO:0016887
Viun7g00566 1116 CDD ABCG_EPDR 507 733 - -
Viun7g00566 1116 MobiDBLite consensus disorder prediction 329 361 - -
Viun7g00566 1116 FunFam ABC transporter G family member 24 503 745 - -
Viun7g00566 1116 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 443 1103 - -
Viun7g00566 1116 Pfam ABC transporter 528 678 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00566 Viun-Chr7 4378842 4390157 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00566 533 739 Calmodulin-binding Proteins AT2G36910 26.549 7.62e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00566 - - gmx:100783798 1907.11