Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00551 ATGAGAGAAGATGAATCAAATTGGTTCTCAAAGTGGGAAGAAGAGTTACCTTCACCAGAGGAACTCATGCCCTTATCCCAAACCCTAATAACCCCTCACCTTGCCGTAGCTTTTGACATAACCAACTCTTCCCAGAACAACCACCACCAACAGCAGCAGTTTCCGCTTCAGCCACCTTCCGGCGCGGAGGAGGAACCGGCGCGGACTCTGAAACGGCCGCGACTGGTGTGGACCCCACAGCTGCACAAGCGCTTCGTGGATGCCGTGGCCCACTTGGGGATCAAGAACGCCGTTCCCAAGACCATAATGCAGCTCATGAGCGTCGACGGGTTGACCCGCGAAAACGTCGCCAGCCACCTCCAGAAATACCGCCTCTACTTGAAGCGCATGCAGGGTTTGGCCGGAGGTGCCGCCGCCGCAGACTCCGCCACGGACCACCTCTTCGCCAGCTCGCCTGTGCCGCCGCACTTCCTGCACCCGGCTGCCCGCTCGGCCTCTGACCACTACCTGCCCTTTGTGCCGGCGTTGCAGCAGCACCGCAATCACCACCACCACATGGCGGTGGCTGCTCATTTTGGTTCGCCGCGGAATGCGCACTTTGAACTCCCCGTTCTGTCAAGGATGGGAGCTTCGGTGCCGGGTTATGTGGAGGATGTGGAGTCGGAAAGGAGGAAGGTTCTTACTTTGTTTCCAGCTGGAGATGATTGA 708 0.5847 MREDESNWFSKWEEELPSPEELMPLSQTLITPHLAVAFDITNSSQNNHHQQQQFPLQPPSGAEEEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLAGGAAAADSATDHLFASSPVPPHFLHPAARSASDHYLPFVPALQQHRNHHHHMAVAAHFGSPRNAHFELPVLSRMGASVPGYVEDVESERRKVLTLFPAGDD 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00551 235 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 77 128 IPR017930 -
Viun7g00551 235 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 2 194 IPR044841 GO:0003700|GO:0006355
Viun7g00551 235 MobiDBLite consensus disorder prediction 44 68 - -
Viun7g00551 235 FunFam Two-component response regulator 68 131 - -
Viun7g00551 235 Gene3D - 69 131 - -
Viun7g00551 235 NCBIfam myb-like DNA-binding domain, SHAQKYF class 73 125 IPR006447 GO:0003677
Viun7g00551 235 MobiDBLite consensus disorder prediction 44 58 - -
Viun7g00551 235 Pfam Myb-like DNA-binding domain 76 124 IPR001005 -
Viun7g00551 235 SUPERFAMILY Homeodomain-like 69 129 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00551 Viun-Chr7 4269223 4270842 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00551 1 235 G2-like Transcription Factor Family AT5G05090 57.836 1.51e-78 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Viun7g00551 Myb_DNA-binding 1.5e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00551 - - vra:106771029 397.512