Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00521 ATGTATAGTGATGCTGCTGCTGAGGCCGAATCTGAATCTGAGCGCAACAGAATGAGTTGTGGCGCTGATGAAGAAGAACAAGGCTCCTTCAAGAGCTTGGCCAAGCAAACGGAGCAGAGTTATCAGTTGCAGCTAGCGCTCGCTCTTCGTCTCTCTTCTCATGCTTCTGCTTCATCCGATCACTCTTCGTCTCCGGCTCAGACATTATCACACCGTTTTTGGGTGGATGGTTGTTTGCTATACTCTGACCAAATTCTAGATGGCTTTTACTTAATCCATGGGATGGATGCATATACATGGACTCTAAGTACTGATTTGCAGAATGTTGGTATTATTCCATCGTTTGAATCACTCATGTCAGTTGAACCTGGTGATGACTCGTCAATTGTTGTGGTTGCCATTGATAAATCTAGAGATCCTGGTTTGAGAGAACTGCAAAACAGGGTAGCAAGTCTTTCAAATAACTGGATTACCACTAAAGATGCAACTGATCAGCTTGCAAGTCTTATTTGCAATAGGATGGGGGGAGGGTCTTTAACCGAGGAAAATTTAGGTATACGCTGGAAGGAATGCACCCAACTTCTTAAAAGCTGCCTGCACTCTGTCATTCTTCCAATTGGAAGCTTACCCATTGGCCTTTGTGTCCATCGAGCGTTGCTGTTTAAAGTGTTGGCTGACTTAATCAATCTACCATGCCGTATTGCAAAGGGCTGCAAGTATTGCAGAAAGGATGTGGGAGCTTCATGCATAGTGCAATTTGGTTCTGACAGGGAGTATATGATTGATTTAATTGGAAGGCCTGGGGCAACATGTCAACCTGATTCTTTTCTGAATTCTGCTTCTTCAATGTTGGTTGCTTCACCATTATGTCATCCAAAGTTCAAGCCAGTTGAAACAGCTGAATATACAAAGACACTTGCTCAATTGTATTTCTTGGACAGTCAAGCACTTCATCTTGTATTTGATACTACATCAGGACCTGCTGTTAATCACAGTGACAAAATGGATATGCAGCGAACTGAAGCTTTGGGTGCAAATTATGCCGGTGGAAACAACCATCTGATTGCTTTGATTCCTGGTGCAGAGGAGTATGAGTATTTCAATGAAGTAGACCAGACAGTCTTGGATTATCCAAGTCATGAAGTTGATCTTGACGAGGAGGATCTGGATATTCCTTGGAGTGAACTTATTTTGAAGGAGAACATTGGGACAGGGTCATTTGGAACTGTCCTTCGTGCAGACTGGCGTGGTTCCGATGTTGCAGTGAAAATTCTTAAAGTGCAAGGTTTTGATCCTGGGCGATTTGAAGAATTTCTAAAGGAGGTCTCACTCATGAAGCGCCTACGGCATCCAAATATTGTACTCTTGATGGGTGCAGTTATTCAACCCCCTAAGTTATCAATTGTAACAGAGTATTTATCTAGAGGCAGTTTGTACGAACTTCTGCACATGCCCAATGTTGGATCATCACTTAGTGAGAGGTGTCGCTTAAAAATGGCTTATGATGTGGCAAGCGGAATGAATTATCTTCATCAAATGAGACCCCCCATTGTTCATAGAGATTTGAAGTCTCCAAATCTTTTGGTTGATGATTCATACACTGTTAAGGTATGTGACTTCGGTCTTTCACGCACAAAGGCAAACACATTTCTTTCTTCTAAAACCGCAGCTGGGACGCCTGAATGGATGGCACCCGAAGTCATCAGAGGCGAACTGTCAAACGAAAAGTGTGATGTATTCAGCTTTGGTGTAATTTTGTGGGAACTAGTGACCCTGCAACAACCATGGAGACATTTAAATCCTTCTCAGTGTAGGTTGTTGCGGCTGTTGGTTTTATGGACAAAAGGCTAG 1851 0.4295 MYSDAAAEAESESERNRMSCGADEEEQGSFKSLAKQTEQSYQLQLALALRLSSHASASSDHSSSPAQTLSHRFWVDGCLLYSDQILDGFYLIHGMDAYTWTLSTDLQNVGIIPSFESLMSVEPGDDSSIVVVAIDKSRDPGLRELQNRVASLSNNWITTKDATDQLASLICNRMGGGSLTEENLGIRWKECTQLLKSCLHSVILPIGSLPIGLCVHRALLFKVLADLINLPCRIAKGCKYCRKDVGASCIVQFGSDREYMIDLIGRPGATCQPDSFLNSASSMLVASPLCHPKFKPVETAEYTKTLAQLYFLDSQALHLVFDTTSGPAVNHSDKMDMQRTEALGANYAGGNNHLIALIPGAEEYEYFNEVDQTVLDYPSHEVDLDEEDLDIPWSELILKENIGTGSFGTVLRADWRGSDVAVKILKVQGFDPGRFEEFLKEVSLMKRLRHPNIVLLMGAVIQPPKLSIVTEYLSRGSLYELLHMPNVGSSLSERCRLKMAYDVASGMNYLHQMRPPIVHRDLKSPNLLVDDSYTVKVCDFGLSRTKANTFLSSKTAAGTPEWMAPEVIRGELSNEKCDVFSFGVILWELVTLQQPWRHLNPSQCRLLRLLVLWTKG 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00521 616 SMART serkin_6 396 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g00521 616 FunFam Serine/threonine-protein kinase isoform 1 386 474 - -
Viun7g00521 616 ProSitePatterns Protein kinases ATP-binding region signature. 402 423 IPR017441 GO:0005524
Viun7g00521 616 ProSitePatterns Serine/Threonine protein kinases active-site signature. 517 529 IPR008271 GO:0004672|GO:0006468
Viun7g00521 616 SUPERFAMILY Protein kinase-like (PK-like) 380 605 IPR011009 -
Viun7g00521 616 MobiDBLite consensus disorder prediction 1 33 - -
Viun7g00521 616 ProSiteProfiles Protein kinase domain profile. 396 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g00521 616 PRINTS Tyrosine kinase catalytic domain signature 511 529 IPR001245 GO:0004672|GO:0006468
Viun7g00521 616 PRINTS Tyrosine kinase catalytic domain signature 558 568 IPR001245 GO:0004672|GO:0006468
Viun7g00521 616 PRINTS Tyrosine kinase catalytic domain signature 577 599 IPR001245 GO:0004672|GO:0006468
Viun7g00521 616 PRINTS Tyrosine kinase catalytic domain signature 470 483 IPR001245 GO:0004672|GO:0006468
Viun7g00521 616 Pfam Protein tyrosine and serine/threonine kinase 397 603 IPR001245 GO:0004672|GO:0006468
Viun7g00521 616 Pfam Ethylene-responsive protein kinase Le-CTR1 66 269 - -
Viun7g00521 616 CDD STKc_MAP3K-like 402 603 - -
Viun7g00521 616 Gene3D Transferase(Phosphotransferase) domain 1 475 612 - -
Viun7g00521 616 MobiDBLite consensus disorder prediction 8 31 - -
Viun7g00521 616 Gene3D Phosphorylase Kinase; domain 1 389 474 - -
Viun7g00521 616 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 64 603 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00521 Viun-Chr7 4056331 4081033 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00521 34 603 MAP Kinase Kinase Kinase AT5G03730 57.692 0.0 634
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Viun7g00521 PK_Tyr_Ser-Thr 7.8e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00521 K14510 - gmx:100807496 1083.55