Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00503 ATGCCTTTCATATTTCCAAAGCTTCTGTCCATGAAGCTCCAACCCTTTTGGCTGCTTCTTCTAATGTGCTTTTCTGCATTTCCTCATTCTCATGCTTCTAATTCTTCTCGGGTTGCTTCAGAAGCAAATGCTCTCCTGAAGTGGAAAGTGAGTCTTGACAACCAGAGTCAAGCTTCTCTCTCTTCATGGAGTGGCAACAGTTCTTGCAATTGGCTCGGAATTGAATGTGATCACTCCAAATATGTGTCCAAAATAAATCTTCCAGGTATTGGATTAAGAGGTACGCTTGAAAATCTCAACTTCACGATGTTTACAAATATTCACACTCTAAATGTAAGTAACAACAACTTGAATGGAAGCATTCCTGCTCAAATTGGAGTTCTATCCAATCTAGTTGTTCTTGATTTGTCTGCTAATAAACTATCTGGGATTATTCCTTCTGAAATAACACAGTTGATTGGCCTTCATGATTTGAACATGAGTTTTAATACTTTTAGTGGGTCCCTTCCCCAAGAAATAGGGAGATTGAGGGAGCTGAGAATGCTTCATGTTCCTTGGTGCAATCTCACAGGGACAATCCCAATCTCTATAAAAAAGTTGAACAATTTGTTTCATCTAGATGTGGGAGGCAACAACCTTTTTGGTATTCCTCAGGGAATTTGGCATTCAACCCTAAAGCACTTGTCACTTGCCGTTAATAATTTCCATGGTTCCATTCCTAAAGAAATTGTAAATTTGAGGAATGTGGAGATTCTATATCTTTTTGGGAGTGGTCTTTCTGGCACCATACCCCAAGAAATTGGGATGTTGGGGAAAATTATAGAGCTCGACTTGAGCGGTTGTAATCTTAGTGGACCTATACCTATTTCAATTGGAGCTTTGACCAATATGTTACGTCTCGGCTTGCACAACAACCAACTTTCTGGTAACATTCCTAGTGAACTTGGAAATTTGCATTCCCCTATAACAATCGAGTTGTCAAACAACAACCTCTCAGGACCAATCCCGACTTCTATAGGTAACATGGTCAATTTGGAATTCCTTTTACTTGATCGAAACAAACTCTCTGGATCCATTCCTTCCACTATTGCAAATTTGTCAAAGCTTCGTTATTTATCTTTATTTCAAAATTATCTCAATGGTAAGATTCCAATAGAAATGAATAGGCTTATTGCTTTGGAAAGTTTGCAACTAGCTAATAATAATTTTGTTGGTCATTTACCTCATAACATTTGTGTTGGTGGAAAATTGGCAAAATTTTCCGCTAGCAATAACTATTTCACTGGCCATATACCAAAGAGTTTGAAGAATTGTTCTAGCCTTATACGAGTCAGACTTCAGGAAAATCAACTAACTGGAAATATAACAGATGCTTTTGATGTACTTCCGAACTTGGATTACATCGAATTGAGTGAAAACAATTTTTATGGTCATCTTTCACCAAATTGGGGGAAGTTCCGTAGTCTCACAAGCCTCAAGATCTCAAACAATAATTTATCAGGTGTTTTCCCACCAGAGCTAGGTGGGGCAACAAAATTACAAGAACTTCAATTATCCTCAAATCATCTTACAGGAAACATTCCACAAGATTTATGTAATTTGGTCTTGTTGTTTCGTCTATCGCTCAACAACAATGATCTTTCAGGAAATATTCCCAAAAGAATTGCATCGATGAAGAATCTTCAGTTTTTCAGTATTGGATCTAATAATTTGTCTGGCTTAATTCCAAACCAACTTGGAAATTTAGTCAAATTATGGAACATGAATTTTAGCCAGAATAAATTTGAGGGGAATATTCCCTTGGAGCTTGGCAAATTAATATCTCTTACAACTCTTGATCTCAGTGGAAATTTCTTGAGCGGAAGATTAACACATATGCTTGGGGGATTAAACAAATTAGAAACATTGAATCTCTCTCACAATAGTCTTTCAGGTGATCTTTCTTGCTTTGATGATATGATGAGCTTGACTTCTATTGATGTATCGTCCAATGAGTTTGAGGGTCCACTTCCAAACATTCCAGTCTTTCGCAATGCTACAATGGAAGCATTAAGAAATAATAAAGGCTTGTGTGGCAATGTTAGCGGCTTAAAGCCTTGCCTAACACTAAGTGGGAAATCACATCATCATGTGACAAAAAAAGTTATAACAATGGTTCTACCCCTTACTTTGGGCACTCTAATGCTGGCATTGTTTGTTTTTGGAGTCTTGTATTATTTATGCAAAACTTCAGTGAAAATGGAAGAGCGAGCTACCAATTTACAAACTCTAAATACATTTGCAATATGGAGTTATGATGGCAAAATGGTATTCGAGAATATTGTTGAAGCTACTGAAAATTTTGACGATAAGCATCTCATTGGAGTTGGAGGGCAAGGACGAGTTTACAAAGCAATGTTACCCACAGGTCAAGTTGTTGCTGTAAAGAAAATGCATTCAGTTCCAAATGGAGAAATACTCAATATGAAAGCTTTCACAAGTGAGATCCAAGCTCTGACAGAAATTCGCCATCGTAACATTGTAAAGTTATATGGTTTTTGTTCACATTCACAATGGTCATTTATGGTGTGTGAATTCTTGGAGAAGGGCAATGTCCAGAATATTTTGAAGGATGATGAACAAGCAATTGCATTTGATTGGAGTAAGAGAGTGAATGTCGTCAAAGGTGTAGCAAATGCTTTATTCTACATGCACCATGATTGCTCACCTCCAATTATTCATCGTGATATATCAAGTAAGAATGTTCTCTTGGATTTGGAATATGTGGCACATGTCTCAGATTTCGGAACAGCAAAGTTTCTTAATCCCAATTCATCCAATTGGACCTCATTTGTAGGAACCTTTGGATATGCTGCTCCAGAACTTGCTTACACAATGGAGGTGAATGAGAAATGTGATGTGTATAGTTTTGGAGTGTTGGCATGGGAAATACTTCTTGGAAAGCACCCTAGTGATTTTATATCATCTTCATCCACTGGTGTGGCCTTAACACTTGATCACTTGACATTGATGGATAATTTGGACGAGCGTCTCCCTCCTCCAACAAAACGTTTAGTCAAAGAGGTGACATCAATTGCAAAGATAACAATTGCTTGCTTGGCTGAAAGTCCACAGTCTCGTCCTACTATGAAGGAGGTTTGCAATCAACTCTCTGGACCAATCCCTACTTCCATAGGTAACATGCTCAATTTGGAATCCATTTTTTTTGCTGAAAACAACCTCTCTGGATCCATTCCTTCCACTATTGGTAATTTTGGCAAGATTCCCATAGAAATGAACAGGCTTACTGCTTTGGAAAATTTTCACTTAGCTGATAATAAATTTGTTGGCCAATTGCCTCACAATGTTTGCATTGGTGGAAAGTTGACACGTTTTACTGCTAGCAATAACAATTTTACTGGCCATATTCCAGAGAGTTTGAGGGCTTGTTCTAGTCTTATTAGAGTCAGACTTCAGCAAAATCAACTAACTGGAAACATAACAAATTCTTTTGATGTGCTTCCAAATTTGAATTACATCGAATTGAGTGAAAACAATTTTTATGGTCATCTTTCACCAAATTGGGGAGAGTTTCGTAGTCTCACAAGCCTCAAGATCTCTAACAATAATTTATCAGGTGGTATCCCACCAGAGCTAGGCAGGGCAACCAATTTACAAGAACTTCAGTTATCCTCAAATCATCTTACAGGAAATATCCCACAAGATTTGTGTAATTTGGTCCTGTTGTTTGATCTATCTCTCAACAACAATAATCTTTCAGGAAATATTCCCACACAAATTGCATCAATGAAGAATCTTAAAATTATTAGGCTTGGATCTAATAATTTGTCTGGCTCAATTCCAAACCAACTTGGAAATTTGCTCAGATTAGGTGACATGAATTTGAGCCAAAATAAATTCGAGGGAAATATTCCTCTAGAGCTGAGCAAATTGACATCCCTTTCAACTCTTGATCTCAGTGAAAATTTGTTGAGTGGAAGATTAACACATATGCTTGGAGCATTGGAAAGATTAGAAACATTGAATCTCTCTCGCAATAGTCTTTCAGGAAATGTTTCTACTATCTTTGGTGATATGATGAGCTTGACTACTATTGATATATCTTACAATGAGTTTGAGGGTCCTCTTCCCAATATTCCAGTCTTCCGCAATTCTACAATTGAAACATTAAGAAATAATAAAGGCTTGTGTGGCAATGTTAGTGGCTTGTAGCCTTGCCTAACATTAGCCACTGAAAATTTTGACGACAAGCATCTCATTGGAGTTGGGGGGCAAGGACGAGTTTACAAAGCAATGTTACCAACAGGTCAGGTTGTTGCTGTGAAGAAACTGTATCCCGTTGTAAACTGAGAAATGCTTAATGCCAAAGCTTTCACAAGGGAGATTCAAGCTCTGACAGAAATTCGACATCGTAAAATTGTAAAGTTATATGGGTTTTGTTCACATTCACGATGGTCCTTTATGGTGTATGAATTCTTGGAGAAGGACAATGTCCAAAATATTTTGAAGGATGACGAACAAGCAATTGCATTTGATTGGAATAAGAGAGTGAATGTTATTAAAGATGTAGCAAATGCTTTATTCTACATGCACTATGATTGCTCACCACCAATTATTCATCGTGATATATCAAGTAAAAATGTCCTTTTGGATTTGGAATATGTGGCACATGTCTCAGATTTTGGAACGGCCAAGTTTCTTAATCCCAATTCATCGAATTGGACCTCATTTGTTGGACCTTTGGATATGCTGCTCCAGAAATGTGACGTGTATAGTTTTGGAGTGTTGGCATGGGAAATACTTCTTGGAAAGCACCCTGGTGATTTTATATCTTCTTTATTGCTATCATCTTCATTCATTGGTGTTGCCTCAACACTTGATGATATGACATTGATGGTTAAGTTGGACCAGCGTCTCCCTCATCCAACAAAGCGTTTATTTAAAGAGGTGGCATCAGTTGCTAATATAGGACTGGCTTGCATGCTTGAAAGTCCACGAACTCGCCCTACTATGAAGGAGGTTGTCAAGGAGCTTGTAGTGTAA 5043 0.3764 MPFIFPKLLSMKLQPFWLLLLMCFSAFPHSHASNSSRVASEANALLKWKVSLDNQSQASLSSWSGNSSCNWLGIECDHSKYVSKINLPGIGLRGTLENLNFTMFTNIHTLNVSNNNLNGSIPAQIGVLSNLVVLDLSANKLSGIIPSEITQLIGLHDLNMSFNTFSGSLPQEIGRLRELRMLHVPWCNLTGTIPISIKKLNNLFHLDVGGNNLFGIPQGIWHSTLKHLSLAVNNFHGSIPKEIVNLRNVEILYLFGSGLSGTIPQEIGMLGKIIELDLSGCNLSGPIPISIGALTNMLRLGLHNNQLSGNIPSELGNLHSPITIELSNNNLSGPIPTSIGNMVNLEFLLLDRNKLSGSIPSTIANLSKLRYLSLFQNYLNGKIPIEMNRLIALESLQLANNNFVGHLPHNICVGGKLAKFSASNNYFTGHIPKSLKNCSSLIRVRLQENQLTGNITDAFDVLPNLDYIELSENNFYGHLSPNWGKFRSLTSLKISNNNLSGVFPPELGGATKLQELQLSSNHLTGNIPQDLCNLVLLFRLSLNNNDLSGNIPKRIASMKNLQFFSIGSNNLSGLIPNQLGNLVKLWNMNFSQNKFEGNIPLELGKLISLTTLDLSGNFLSGRLTHMLGGLNKLETLNLSHNSLSGDLSCFDDMMSLTSIDVSSNEFEGPLPNIPVFRNATMEALRNNKGLCGNVSGLKPCLTLSGKSHHHVTKKVITMVLPLTLGTLMLALFVFGVLYYLCKTSVKMEERATNLQTLNTFAIWSYDGKMVFENIVEATENFDDKHLIGVGGQGRVYKAMLPTGQVVAVKKMHSVPNGEILNMKAFTSEIQALTEIRHRNIVKLYGFCSHSQWSFMVCEFLEKGNVQNILKDDEQAIAFDWSKRVNVVKGVANALFYMHHDCSPPIIHRDISSKNVLLDLEYVAHVSDFGTAKFLNPNSSNWTSFVGTFGYAAPELAYTMEVNEKCDVYSFGVLAWEILLGKHPSDFISSSSTGVALTLDHLTLMDNLDERLPPPTKRLVKEVTSIAKITIACLAESPQSRPTMKEVCNQLSGPIPTSIGNMLNLESIFFAENNLSGSIPSTIGNFGKIPIEMNRLTALENFHLADNKFVGQLPHNVCIGGKLTRFTASNNNFTGHIPESLRACSSLIRVRLQQNQLTGNITNSFDVLPNLNYIELSENNFYGHLSPNWGEFRSLTSLKISNNNLSGGIPPELGRATNLQELQLSSNHLTGNIPQDLCNLVLLFDLSLNNNNLSGNIPTQIASMKNLKIIRLGSNNLSGSIPNQLGNLLRLGDMNLSQNKFEGNIPLELSKLTSLSTLDLSENLLSGRLTHMLGALERLETLNLSRNSLSGNVSTIFGDMMSLTTIDISYNEFEGPLPNIPVFRNSTIETLRNNKGLCGNVSGLXPCLTLATENFDDKHLIGVGGQGRVYKAMLPTGQVVAVKKLYPVVNXEMLNAKAFTREIQALTEIRHRKIVKLYGFCSHSRWSFMVYEFLEKDNVQNILKDDEQAIAFDWNKRVNVIKDVANALFYMHYDCSPPIIHRDISSKNVLLDLEYVAHVSDFGTAKFLNPNSSNWTSFVGXPLDMLLQKCDVYSFGVLAWEILLGKHPGDFISSLLLSSSFIGVASTLDDMTLMVKLDQRLPHPTKRLFKEVASVANIGLACMLESPRTRPTMKEVVKELVV 1681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00503 1681 SMART LRR_typ_2 1095 1119 IPR003591 -
Viun7g00503 1681 SMART LRR_typ_2 1191 1215 IPR003591 -
Viun7g00503 1681 SMART LRR_typ_2 558 581 IPR003591 -
Viun7g00503 1681 SMART LRR_typ_2 1263 1287 IPR003591 -
Viun7g00503 1681 SMART LRR_typ_2 342 366 IPR003591 -
Viun7g00503 1681 SMART LRR_typ_2 630 652 IPR003591 -
Viun7g00503 1681 SMART LRR_typ_2 486 510 IPR003591 -
Viun7g00503 1681 SMART LRR_typ_2 390 414 IPR003591 -
Viun7g00503 1681 SMART LRR_typ_2 1311 1334 IPR003591 -
Viun7g00503 1681 SMART LRR_typ_2 128 152 IPR003591 -
Viun7g00503 1681 SMART LRR_typ_2 1216 1239 IPR003591 -
Viun7g00503 1681 SMART LRR_typ_2 1335 1358 IPR003591 -
Viun7g00503 1681 SMART LRR_typ_2 511 534 IPR003591 -
Viun7g00503 1681 SMART LRR_typ_2 294 318 IPR003591 -
Viun7g00503 1681 SMART LRR_typ_2 200 223 IPR003591 -
Viun7g00503 1681 SMART LRR_typ_2 606 629 IPR003591 -
Viun7g00503 1681 FunFam Leucine-rich repeat receptor protein kinase MSP1 744 859 - -
Viun7g00503 1681 ProSitePatterns Tyrosine protein kinases specific active-site signature. 905 917 IPR008266 GO:0004672|GO:0006468
Viun7g00503 1681 FunFam Nuclear pore complex protein NUP107 38 195 - -
Viun7g00503 1681 FunFam MDIS1-interacting receptor like kinase 2 860 1055 - -
Viun7g00503 1681 Pfam Leucine rich repeat N-terminal domain 40 77 IPR013210 -
Viun7g00503 1681 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 215 413 - -
Viun7g00503 1681 ProSiteProfiles Leucine-rich repeat profile. 632 654 IPR001611 GO:0005515
Viun7g00503 1681 SUPERFAMILY L domain-like 417 679 - -
Viun7g00503 1681 Gene3D Ribonuclease Inhibitor 40 154 IPR032675 -
Viun7g00503 1681 Gene3D Ribonuclease Inhibitor 155 220 IPR032675 -
Viun7g00503 1681 Gene3D Ribonuclease Inhibitor 221 271 IPR032675 -
Viun7g00503 1681 FunFam Uncharacterized protein 1117 1415 - -
Viun7g00503 1681 FunFam Uncharacterized protein 414 709 - -
Viun7g00503 1681 PANTHER LEUCINE RICH REPEAT KINASE 2 339 1050 - -
Viun7g00503 1681 FunFam Leucine-rich repeat receptor protein kinase MSP1 1405 1492 - -
Viun7g00503 1681 SUPERFAMILY RNI-like 1048 1390 - -
Viun7g00503 1681 SUPERFAMILY Protein kinase-like (PK-like) 1405 1679 IPR011009 -
Viun7g00503 1681 SUPERFAMILY Protein kinase-like (PK-like) 763 1050 IPR011009 -
Viun7g00503 1681 Gene3D Transferase(Phosphotransferase) domain 1 860 1051 - -
Viun7g00503 1681 ProSiteProfiles Protein kinase domain profile. 781 1069 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g00503 1681 SUPERFAMILY L domain-like 68 404 - -
Viun7g00503 1681 Gene3D Phosphorylase Kinase; domain 1 741 859 - -
Viun7g00503 1681 Gene3D Phosphorylase Kinase; domain 1 1405 1492 - -
Viun7g00503 1681 Gene3D Ribonuclease Inhibitor 272 388 IPR032675 -
Viun7g00503 1681 Gene3D Transferase(Phosphotransferase) domain 1 1493 1680 - -
Viun7g00503 1681 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1538 1550 IPR008266 GO:0004672|GO:0006468
Viun7g00503 1681 Pfam Protein tyrosine and serine/threonine kinase 1418 1679 IPR001245 GO:0004672|GO:0006468
Viun7g00503 1681 Gene3D Ribonuclease Inhibitor 1052 1404 IPR032675 -
Viun7g00503 1681 Gene3D Ribonuclease Inhibitor 389 701 IPR032675 -
Viun7g00503 1681 Pfam Protein kinase domain 782 1048 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g00503 1681 Pfam Leucine rich repeat 608 665 IPR001611 GO:0005515
Viun7g00503 1681 Pfam Leucine rich repeat 487 547 IPR001611 GO:0005515
Viun7g00503 1681 PRINTS Leucine-rich repeat signature 131 144 - -
Viun7g00503 1681 PRINTS Leucine-rich repeat signature 630 643 - -
Viun7g00503 1681 ProSiteProfiles Protein kinase domain profile. 1414 1681 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00503 Viun-Chr7 3893818 3918740 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00503 5 953 Receptor kinase-like Gene Family AT4G08850 42.471 0.0 719
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Viun7g00503 Pkinase 6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00503 - - vun:114189705 3275.34