Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00502 ATGTTTACAAACATTCACACTCTTAATCTAAGCATCAACTTCTTGAATGGGAGTATTCCTCCTCAAATTGGAGTCATGTCCAATCTAATTATTCTTGATTTGTCTTTTAATGAACTTTCTGGGGTTATTCCTTCTGAAATAACACAATTGGTCGGTCTTCATACATTGAACATGAGTGACAATATTTTCAGTGGGTCTCTTCCTCAAGAAATAGGTAGATTGAGGGAGCTGAGAATGCTTCATGTTCCTTGGTGCAATCTCACAGGGACAATCCCAATCTCTATAGAAAAGTTCAACAATTTGTTTCATCTAGACGTGGGAGGCAACAACCTTTCTGGCAGGATTCCTCATAGAATATGGCGTATGGACCTAAAGCATTTGTCACTTGCAATTAATAAATTCAATGGTTCCATCCCCGAAGAAATTGTGAATATGAGGAACTTGGAGATTCTGTATCTTCAGAAAAGTGGCCTTTCTGGAAACATGCCCCAAGGAATTGGGATGCTGGGGAAAATAGTACATCTAGACATGAGCAATTGTAATCTTAATGGGTCCATACCTCTTTCAATTGGAGCTTTGACCAATATATCCATTCTTAGCTTACACGACAACCACCTTTCTGGTCACATTCCTAGTGAAATTTGTAAGTTAATCAACCTTGAGATTCTTGATTTGTCTAATAATTTTCTCTCTGGCAAAATCCCTTCAACAATAGGAAACTTGAGATATCTGAAGTATTTTTCCCTTCTTGGAAACAAACTCTCTGGCTCTGTTCCTCGTGAAATTGGAAACCTAAGCAATCTAAATTTTCTTAGCCTTTTTGGCAACCAATTCTCTGGCTCTATTCCTCGTGAAATTGGATTTTTGAGAACACTCGGTCAACTAGATTTGTCTAATAATTTTCTCTCTGATAAAATTCCCTCCACAATTGGAAACTTGAGCAATCTAGTTTATCTTTACCTTTATGCAAACCAATTCTCTGGCATTATCCCAGATGAAGTTGGAAATTTGCATTCCCTTGTAACAATTCAATTGCTACACAACAACCTCTCTGGACCAATTCCGACCTCCATAGGTAACCTGATCAATTTGAAATCCATTTCACTTTATGATAATAACCTCTCTGGGCCAATCCCGACTTCCATAGGTAACATGGTCAACTTGGAATCCATTTTACTTCATCAAAACAAACTCTCCGGATCCATTCCTTCCACTATTGGAAATTTGTCAAAGCTTCGTGGATTAACTTTATTTCAAAATTATCTCAACGGCAAGATTCCAATAGAAATGAATAGACTTGCTACTTTGGAAAATTTGCAACTAGCTGATAATTATTTTCTTGGCCATTTACCTCACAACATTTGTAGTGGTGAAAAGTTGACACATTTTTCTGCTAGCAATAACAATTTTACTGGCTATATTCCGGAGAGTTTGAAGAATTGCTCTAGTCTTATAAGACTCAGGCTTCAAAAAAATCAACTAACTGGAAACATAACAAATGCTTTTGATGTACTTCCAAACTTGGATTACATCGAATTGAGTGAAAACAATTTTTATGGTCATCTTTCACCAAATTGGGGAAAGTTCCGTAATCTCACAAGCCTCAAGATCTCAAACAATAATTTATCAGGTGTTATCCCACCAGAGCTAGGTGGGGCAACAAAATTACAAGAACTTCAATTATCCTCAAATCATCTTACAGGAAACATTCCACAAGATTTATGTAATTTGGTCCTGTTGTTTCATCTATCACTCCACAACAATGATCTTTCAGGAAATATTCCCAAAAGAATTGCATCGATGAAGAATCTTCAGTTTTTCAGTATTGGATCTAATAATTTGTCTGGCTTAATTCCAAATCAACTTGGAAATTTAGTCAAATTATGGAACATGAATTTGAGCCAGAATAAATTTGAGGGGAATATTCCCTTGGAGCTTGGAAAATTAATATCTCTTACAACTCTTGATCTCAGTGGAAATTTGTTGAGGGGAAGATTAACACATATGCTTGGAGGATTAAACAAATTAGAAACATTGAATCTCTCTCACAATAGTCTTTCCGGTGATCTTTCTTGCTTTGATGATATGATGAGCTTGACATCTATTGATATATCGTACAATGAGTTTGAGGGTCCACTTCCAGACATTCCAGTCTTTCGCAATGCTACAATGGAAGCATTAAGAAATAATAAAGGCTTGTGTGGCAATGTTAGCGGCTTAAAGCCTTGCCTAACACTGAGTGGGAAATCGCATAATCATGTGACAAAAAAAGTCATAACAATGGTTCTACCCCTTACTTTGGGCACTATAATGCTGGCATTGTTTGTTTTTGGAGTCTTGTATTATTTATGCAAAACTTCTGTGAAAATGGAAGAGCTGGCTACCAATTTACAAACTCTAAACACATTTGCAATATGGAGTTATGATGGCAAAATGGTATTCGAGAATATTGTTGAGGCTACTGAAAACTTTGATGATAAGCATCTCATTGGAGTTGGGGGGCAAGGACGAGTTTACAAAGCATTGTTACCCACAGGTCAAGTTGTTGCGGTAAAGAAACTACATTCAGTTCCAAATGGAGAAATACTTAATATGAAAGCTTTTACAAGTGAGATCCAAGCTCTTTCAAAAATTCGCCATCGTAACATTGTAAAGTTATATGGGTTTTGTTCACATTCCCATTGGTTATTTGTGGTGTGTGAATTCTTGGAGAAGGGCAATGTCCAGAATATTTTGAAGGATGATGAACAAGCAATTGCATTTGATTGGAATAAGAGAGTGAATGTTATTAAAGATGTAGCAAATGCTTTATTCTACATGCACTATGATTGCTCACCACCAATTATTCATCGTGATATATCAAGTAAAAATGTCCTTTTGGATTTGGAATATGTGGCACATGTCTCAGATTTTGGAACGGCCAAGTTTCTTAATCCCAATTCATCGAATTGGACCTCATTTGTAGGAACCTTTGGATATGCTGCTCCAGAACTTGCGTACACAATGAAGGTAAATGAGAAATGTGACGTGTATAGTTTTGGAGTGTTGGCATGGGAAATACTTATTGGAAAGCACCCTGGTGATTATATATCTTCTTTATTGCTATCATCTTCATTCATTGGTGTTGCCTCAACACTTGATGATATAACATTGATGGATAAGTTGGACCAGCGTCTCCCTCCTTCAACAAAGTGTTCAGTTAAAGAGGTGGCATTGGTTGCGAAGATAGCACTTGCTTGCATGACTGAAAGTCCACGATCTCGCCCTACTATGAAGGAGGTTGTCAATGAGCTTGTAGTGTAA 3303 0.3694 MFTNIHTLNLSINFLNGSIPPQIGVMSNLIILDLSFNELSGVIPSEITQLVGLHTLNMSDNIFSGSLPQEIGRLRELRMLHVPWCNLTGTIPISIEKFNNLFHLDVGGNNLSGRIPHRIWRMDLKHLSLAINKFNGSIPEEIVNMRNLEILYLQKSGLSGNMPQGIGMLGKIVHLDMSNCNLNGSIPLSIGALTNISILSLHDNHLSGHIPSEICKLINLEILDLSNNFLSGKIPSTIGNLRYLKYFSLLGNKLSGSVPREIGNLSNLNFLSLFGNQFSGSIPREIGFLRTLGQLDLSNNFLSDKIPSTIGNLSNLVYLYLYANQFSGIIPDEVGNLHSLVTIQLLHNNLSGPIPTSIGNLINLKSISLYDNNLSGPIPTSIGNMVNLESILLHQNKLSGSIPSTIGNLSKLRGLTLFQNYLNGKIPIEMNRLATLENLQLADNYFLGHLPHNICSGEKLTHFSASNNNFTGYIPESLKNCSSLIRLRLQKNQLTGNITNAFDVLPNLDYIELSENNFYGHLSPNWGKFRNLTSLKISNNNLSGVIPPELGGATKLQELQLSSNHLTGNIPQDLCNLVLLFHLSLHNNDLSGNIPKRIASMKNLQFFSIGSNNLSGLIPNQLGNLVKLWNMNLSQNKFEGNIPLELGKLISLTTLDLSGNLLRGRLTHMLGGLNKLETLNLSHNSLSGDLSCFDDMMSLTSIDISYNEFEGPLPDIPVFRNATMEALRNNKGLCGNVSGLKPCLTLSGKSHNHVTKKVITMVLPLTLGTIMLALFVFGVLYYLCKTSVKMEELATNLQTLNTFAIWSYDGKMVFENIVEATENFDDKHLIGVGGQGRVYKALLPTGQVVAVKKLHSVPNGEILNMKAFTSEIQALSKIRHRNIVKLYGFCSHSHWLFVVCEFLEKGNVQNILKDDEQAIAFDWNKRVNVIKDVANALFYMHYDCSPPIIHRDISSKNVLLDLEYVAHVSDFGTAKFLNPNSSNWTSFVGTFGYAAPELAYTMKVNEKCDVYSFGVLAWEILIGKHPGDYISSLLLSSSFIGVASTLDDITLMDKLDQRLPPSTKCSVKEVALVAKIALACMTESPRSRPTMKEVVNELVV 1100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00502 1100 Gene3D Transferase(Phosphotransferase) domain 1 903 1100 - -
Viun7g00502 1100 SUPERFAMILY RNI-like 199 559 - -
Viun7g00502 1100 Gene3D Ribonuclease Inhibitor 166 284 IPR032675 -
Viun7g00502 1100 Gene3D Ribonuclease Inhibitor 433 744 IPR032675 -
Viun7g00502 1100 Gene3D Ribonuclease Inhibitor 289 432 IPR032675 -
Viun7g00502 1100 Gene3D Ribonuclease Inhibitor 1 164 IPR032675 -
Viun7g00502 1100 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 1 258 - -
Viun7g00502 1100 FunFam Probable leucine-rich repeat receptor-like protein kinase At5g63930 259 354 - -
Viun7g00502 1100 SUPERFAMILY L domain-like 480 735 - -
Viun7g00502 1100 SMART LRR_typ_2 217 241 IPR003591 -
Viun7g00502 1100 SMART LRR_typ_2 529 553 IPR003591 -
Viun7g00502 1100 SMART LRR_typ_2 26 50 IPR003591 -
Viun7g00502 1100 SMART LRR_typ_2 385 409 IPR003591 -
Viun7g00502 1100 SMART LRR_typ_2 554 577 IPR003591 -
Viun7g00502 1100 SMART LRR_typ_2 673 695 IPR003591 -
Viun7g00502 1100 SMART LRR_typ_2 313 337 IPR003591 -
Viun7g00502 1100 SMART LRR_typ_2 433 457 IPR003591 -
Viun7g00502 1100 SMART LRR_typ_2 265 289 IPR003591 -
Viun7g00502 1100 SMART LRR_typ_2 601 624 IPR003591 -
Viun7g00502 1100 SMART LRR_typ_2 649 672 IPR003591 -
Viun7g00502 1100 SMART LRR_typ_2 98 122 IPR003591 -
Viun7g00502 1100 SMART LRR_typ_2 193 216 IPR003591 -
Viun7g00502 1100 ProSiteProfiles Protein kinase domain profile. 824 1100 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g00502 1100 Pfam Protein kinase domain 825 1097 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g00502 1100 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 491 1098 - -
Viun7g00502 1100 SUPERFAMILY Protein kinase-like (PK-like) 806 1098 IPR011009 -
Viun7g00502 1100 ProSitePatterns Tyrosine protein kinases specific active-site signature. 948 960 IPR008266 GO:0004672|GO:0006468
Viun7g00502 1100 PRINTS Leucine-rich repeat signature 673 686 - -
Viun7g00502 1100 PRINTS Leucine-rich repeat signature 29 42 - -
Viun7g00502 1100 Pfam Leucine rich repeat 219 278 IPR001611 GO:0005515
Viun7g00502 1100 Pfam Leucine rich repeat 651 708 IPR001611 GO:0005515
Viun7g00502 1100 Pfam Leucine rich repeat 291 350 IPR001611 GO:0005515
Viun7g00502 1100 Pfam Leucine rich repeat 460 518 IPR001611 GO:0005515
Viun7g00502 1100 Pfam Leucine rich repeat 530 590 IPR001611 GO:0005515
Viun7g00502 1100 FunFam Uncharacterized protein 455 752 - -
Viun7g00502 1100 Gene3D Phosphorylase Kinase; domain 1 785 902 - -
Viun7g00502 1100 FunFam MDIS1-interacting receptor like kinase 2 isoform A 355 454 - -
Viun7g00502 1100 SUPERFAMILY L domain-like 2 303 - -
Viun7g00502 1100 ProSiteProfiles Leucine-rich repeat profile. 675 697 IPR001611 GO:0005515
Viun7g00502 1100 FunFam MDIS1-interacting receptor like kinase 2 903 1100 - -
Viun7g00502 1100 FunFam Leucine-rich repeat receptor protein kinase MSP1 787 902 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00502 Viun-Chr7 3886566 3890230 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00502 151 996 Receptor kinase-like Gene Family AT4G08850 43.392 0.0 676
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Viun7g00502 Pkinase 1.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00502 - - vun:114189705 1441.02