Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00464 ATGACTGCAAATGAAGATGCTGCACAGGAATTTGAACCAAAGAAGAAGCCACCCACAGAGGATGAAAAGAGGAAGAAGAAAATTACGGCGGGGAGTTTGATGAAAGCTTTGATTAGGCCTGGTGGGGGTGATGCTGGACCTTCAGATGGTGATCAGATTATCTATCACTGCACCATTCGAACTTTGGATGGAGTACTCGTGGAATCTACCAGATCTGATTATGGAGGCAAAGGCACCCCAATAAGGCATGTTTTGGGCAAAAGCAAGATATTATTGGGCTTACTTGAAGGAATTCCTACAATGTTGAAGGGCGAAGTGGCAATGTTCAAGATGCAGCATCAGTTGCATTATGGTGAGGATGATTGTCCTATTACCGCCCCCGATGGTTTTCCTAAGGAGGATGAACTTCATTTTGAAATCGAGTTGATAGATTTTTTCAAAGCTAAGGTTGTTACTGATGATTTGGGAGTCGTAAAAAAGGTAGTGCGAGAAGGGCAGGGTTGGGAATCTCCGAGGGAACCTTATGAAGTGAAGGCTTGGATATCAGCAAAGACAGTTACTGGGGAATTGATCATGTCGCATACAGAAGGAGAACCATACTTGTTTACATTTGGAAAATCAGAGCTACCTAAGGGCCTTGAAATGGCAATAGGAACAATGGTTCGGGAAGAGAAGGCTGTTATATATGTTACCACTCAGTATTTAACTGAGTCTCCTCTGATGCCTGTAATAGAAGAGTATGATGAAGTCCATTTTGAAGTGGAGCTGGTTCACTTTATTCAGGTGAGGGACATGCTTGGAGATGGGCGCCTAATAAAACGCCGGATTCGTGATGGCAAAGGTGACTTTCCTATGGATTGTCCCCTTCATGACAGTCTACTTCGTGTTCATTACAAGGGCACTCTTCTTAACGGAGAAAAGAAGGTTTTTTATGATACACGGGTAGACAATGATGGTCAACCATTGGAGTTCTGTTCTGGAGAAGGGCTTGTACCTGAGGGATTTGAAATGAGTGTTCGTCTGATGCTTCCCGGAGAAATAGCTCTCGTTACATGCCCTCCTGACTATGCCTATGATAAGTTTCCAAGGCCTTCAAATGTCCCTGAGGGTGCTCATATTCAATGGGAAATTGAGCTTCTAAGTTTTGAAACGCCAAGGGACTGGACAGGATTGGACTTTAAAACTATAATGGACGAAGCTGAAAGCATCAGAAACACGGGTAACAAGCTGTTCAAACAGGGGAAATTTGAACTTGCCAAGGCAAAGTATGAAAAGTTGCTTCGAGAATTTAATCATATCAATCCTCAAGATGATGAAGAAGGAAAGATTTTTACAGACACACGAAATTTGCTACATTTGAATGTCGCTGCATGCTATCTAAAATTGGGAGAATGCAAAAAGTGCATTGAGACTTGCAACAAGGTTTTGGATGCAAATCCTGCACATGTCAAGGGCCTTTATCGTCGTGGAATGGCCTACATGACTGCCGGAGATTTTGAAGAAGCCAGGGCTGATTTCAAAATGATGATGAAAGTTGACAAGTCAACTGAATCAGATGCAACTGCAGCTCTTCAAAAACTGAAGCAGAAGGAACAGGAAGTGGAGAACAAGGCTAGAAAACAGTTTAAAGGCCTATTTGACAAAAAGCCTGGGGAAATTGCTGAAGCTAAAGCTGATGATGATGATGATGGAGATCAAATAACAAGCGAAAGCCAGCAGAAGGATGAAGTACACGAAGACTCTGATGAAACAAATTTCGAGGATTCACATGAAGGTCCACCTGACACACCTCGAACTAGGTGGTTCTCTCTGTTTTGGCCTTCTGGTAGAAGACTTTTTGAATCTCTTGGGCTTAATAGATGTGCCATACTTTAA 1875 0.4267 MTANEDAAQEFEPKKKPPTEDEKRKKKITAGSLMKALIRPGGGDAGPSDGDQIIYHCTIRTLDGVLVESTRSDYGGKGTPIRHVLGKSKILLGLLEGIPTMLKGEVAMFKMQHQLHYGEDDCPITAPDGFPKEDELHFEIELIDFFKAKVVTDDLGVVKKVVREGQGWESPREPYEVKAWISAKTVTGELIMSHTEGEPYLFTFGKSELPKGLEMAIGTMVREEKAVIYVTTQYLTESPLMPVIEEYDEVHFEVELVHFIQVRDMLGDGRLIKRRIRDGKGDFPMDCPLHDSLLRVHYKGTLLNGEKKVFYDTRVDNDGQPLEFCSGEGLVPEGFEMSVRLMLPGEIALVTCPPDYAYDKFPRPSNVPEGAHIQWEIELLSFETPRDWTGLDFKTIMDEAESIRNTGNKLFKQGKFELAKAKYEKLLREFNHINPQDDEEGKIFTDTRNLLHLNVAACYLKLGECKKCIETCNKVLDANPAHVKGLYRRGMAYMTAGDFEEARADFKMMMKVDKSTESDATAALQKLKQKEQEVENKARKQFKGLFDKKPGEIAEAKADDDDDGDQITSESQQKDEVHEDSDETNFEDSHEGPPDTPRTRWFSLFWPSGRRLFESLGLNRCAIL 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00464 624 Gene3D Tetratricopeptide repeat domain 394 548 IPR011990 GO:0005515
Viun7g00464 624 MobiDBLite consensus disorder prediction 567 595 - -
Viun7g00464 624 FunFam Peptidylprolyl isomerase 7 149 - -
Viun7g00464 624 SUPERFAMILY TPR-like 397 537 IPR011990 GO:0005515
Viun7g00464 624 FunFam Peptidylprolyl isomerase 388 544 - -
Viun7g00464 624 ProSiteProfiles TPR repeat profile. 483 516 IPR019734 GO:0005515
Viun7g00464 624 Pfam Tetratricopeptide repeat 484 507 IPR019734 GO:0005515
Viun7g00464 624 SUPERFAMILY FKBP-like 24 149 - -
Viun7g00464 624 Gene3D - 261 387 IPR046357 GO:0003755
Viun7g00464 624 Gene3D - 1 148 IPR046357 GO:0003755
Viun7g00464 624 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 50 146 IPR001179 GO:0003755
Viun7g00464 624 MobiDBLite consensus disorder prediction 1 31 - -
Viun7g00464 624 MobiDBLite consensus disorder prediction 554 600 - -
Viun7g00464 624 FunFam Peptidylprolyl isomerase 261 385 - -
Viun7g00464 624 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 193 260 IPR001179 GO:0003755
Viun7g00464 624 SMART tpr_5 400 433 IPR019734 GO:0005515
Viun7g00464 624 SMART tpr_5 483 516 IPR019734 GO:0005515
Viun7g00464 624 SMART tpr_5 449 482 IPR019734 GO:0005515
Viun7g00464 624 SUPERFAMILY FKBP-like 149 259 - -
Viun7g00464 624 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 291 383 IPR001179 GO:0003755
Viun7g00464 624 SUPERFAMILY FKBP-like 265 388 - -
Viun7g00464 624 Coils Coil 517 540 - -
Viun7g00464 624 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 292 380 IPR001179 GO:0003755
Viun7g00464 624 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 174 257 IPR001179 GO:0003755
Viun7g00464 624 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 47 143 IPR001179 GO:0003755
Viun7g00464 624 FunFam Peptidylprolyl isomerase 150 260 - -
Viun7g00464 624 MobiDBLite consensus disorder prediction 8 29 - -
Viun7g00464 624 Gene3D - 149 260 IPR046357 GO:0003755
Viun7g00464 624 PANTHER INACTIVE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP6 149 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00464 Viun-Chr7 3527649 3543859 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00464 26 548 Calmodulin-binding Proteins AT3G25230 30.075 1.91e-63 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00464 - - gmx:100818201 1125.92