Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00429 ATGAAGAATCAAGAACCTTTTCAAACCCTCTTCTTCTTCTTCTCCACCCTATTGCTGCTTTCTTTCTCCTCTGCACAGGGAAAATGCCCACCATCATTTCTTTGTGGGAACCTGGGCACCATGTATTTCCCTTACACTGACACGAAACATCCTCATTGTGGGTTGTTGGTGATGCATGGCTGCGATGACCGTGACCCAGATGCGGTTAAAACGATTAAGAACAATGGAGAATGGTTTTTCATCACACGTGATCCAAACACAAACGCCCTTGTGTTCAGAGATGATGAACTTCGCACCTACTTGCTGACACGAAGCTGTGGGGTGTTCGAGAAAAACTACACCAGTTTGGACACCCCTTCTCCTTTCCTTTCACTTCACTTTACCACTGCTACTCTATTCATATGCAACCGCACCCTCAACATCAATCCTCCTTCTTCAGCATTTTATAAATCTACAATATGCCCGAAGGAGGACATCTTCTATGGCACATCTAATGTTGATGAGTCCTTCAGTTACTATTCCGAAGAGCTTCATGGTTCTTATTTTGAACAGTGTTCAATGGTTAGACTTCCAATAAGAGATGCAGAGCTTGTACCTAACTCGAATGGAAGCCTCTTTGACTATGTATCAGCTGATATTCCGGTTAAAATAGAAGTGTCTGATGAGTGTTCTTCTTGTTACCGTCTTAGACGAGGCCAGTGTCAACTTGACAGCCAAGGGAAGTTCTTATGTATACAAGAGAAAACTAGTAGAAAGGTGAAGATAGTGGTAGTAGCTACATCAGCTGCTGGAGCATTGGGAATTTTGATGGTGTTGGCTTGCATCTTACGAAGATACTATTTCCACAAGAAGAACCCCACTTACATAATGATTGAGAACTTTCTGAAGCAACATGGACACCTTTCAGCCAAAAGGTACAGTTATTTGGAGGTAAAGAAAATGACCAACTCCTTCAGAAGCAAATTAGGCCAAGGAGGGTTTGGCAGTGTATACAAAGGGAGATTACAAAATGGAAGTCTTGTGGCAGTGAAGGTTTTAAGTAAGTCAAAAGGTGACGGAGAAGAATTCATCAATGAAGTTGCCAGTATTAGCATGACTTCTCATGTTAACATTGTCAGTTTACTGGGGTTTTGCTTGGAAGGCTCCAAAAGATTTCTCATATACGAGTACATGCCCAATGGATCCCTTGAAAAGTTCATATATGAAGAGAAAGATCCTTTAAGGTTTAAACTCACAATGAATTGCATAACAATGTACAATATTGCCATTGGTGTTGCTCGAGGACTGGAGTATTTGCACAAGGGTTGTAACACCAAAATCTTGCATTTTGACATAAAACCTCACAATATACTACTAGATGAGTTTTTTTGCCCCGAAATATCAGATTTTGGACTTGCTAAAATATGTCCTAGAGAAAAAAGTATTGTATCAATGATAGTTGCCAGAGGAACCATAGGATATATTGCTCCTGAATTGTTCTGCAGAAATTTTGGTGGAGTGTCACATAAATCAGATGTATACAGTTATGGAATGATGGTTTTGGAAATGCTTGGTGCTAGAGAGAATAATAATCGCGGAGTTGATCTTTCAAGTGAAAATTACTTTCCACATTGGATTTACAACCATCTTGAATCAGATCAAGATCTTCAATTTCGAAGCACCAAAAATCGAAATGATGAAGAAATGGTGAGAAAAATGACTATTGTAAGTTTGTGGTGCATACAAACCGACCCTTCAAATCGACCTGCAATGAGTAAAGTGGTGGAAATGATGGAAGGAAGCATTAGCTCTGTGCAAATTCCACCCAAATCTTTCCTTTATTCATCATGGGTTCCCCAATCCCAATCAAGTGATTCTTCATAG 1863 0.3999 MKNQEPFQTLFFFFSTLLLLSFSSAQGKCPPSFLCGNLGTMYFPYTDTKHPHCGLLVMHGCDDRDPDAVKTIKNNGEWFFITRDPNTNALVFRDDELRTYLLTRSCGVFEKNYTSLDTPSPFLSLHFTTATLFICNRTLNINPPSSAFYKSTICPKEDIFYGTSNVDESFSYYSEELHGSYFEQCSMVRLPIRDAELVPNSNGSLFDYVSADIPVKIEVSDECSSCYRLRRGQCQLDSQGKFLCIQEKTSRKVKIVVVATSAAGALGILMVLACILRRYYFHKKNPTYIMIENFLKQHGHLSAKRYSYLEVKKMTNSFRSKLGQGGFGSVYKGRLQNGSLVAVKVLSKSKGDGEEFINEVASISMTSHVNIVSLLGFCLEGSKRFLIYEYMPNGSLEKFIYEEKDPLRFKLTMNCITMYNIAIGVARGLEYLHKGCNTKILHFDIKPHNILLDEFFCPEISDFGLAKICPREKSIVSMIVARGTIGYIAPELFCRNFGGVSHKSDVYSYGMMVLEMLGARENNNRGVDLSSENYFPHWIYNHLESDQDLQFRSTKNRNDEEMVRKMTIVSLWCIQTDPSNRPAMSKVVEMMEGSISSVQIPPKSFLYSSWVPQSQSSDSS 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00429 620 ProSitePatterns Protein kinases ATP-binding region signature. 322 344 IPR017441 GO:0005524
Viun7g00429 620 Gene3D Phosphorylase Kinase; domain 1 292 390 - -
Viun7g00429 620 Pfam Protein kinase domain 320 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g00429 620 ProSitePatterns Serine/Threonine protein kinases active-site signature. 440 452 IPR008271 GO:0004672|GO:0006468
Viun7g00429 620 SUPERFAMILY Protein kinase-like (PK-like) 299 591 IPR011009 -
Viun7g00429 620 Gene3D Transferase(Phosphotransferase) domain 1 391 600 - -
Viun7g00429 620 ProSiteProfiles Protein kinase domain profile. 316 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g00429 620 FunFam PR5-like receptor kinase 391 603 - -
Viun7g00429 620 PANTHER RUST RESISTANCE KINASE LR10-RELATED 290 611 IPR045874 GO:0004672
Viun7g00429 620 SMART serkin_6 316 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g00429 620 FunFam serine/threonine-protein kinase PBS1-like 290 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00429 Viun-Chr7 3151381 3154403 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00429 19 620 Receptor kinase-like Gene Family AT5G38260 39.060 3.50e-130 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Viun7g00429 Pkinase 1.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00429 - - gmx:100807312 990.334