Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00425 ATGGTGTTTTCAGTGATGAGAATTCTTAGCTTGTTGCCTTTTCTGCTTACTTTGTTTCTGTCAAAATCTCTGCTTGTGGATGCTGAGTTGCAGGAACAAACTATACTATTTTCCATCAACAAAAATCTCAGAGTTCCTGGGTGGAATGCCACCAACTCAGATTACTGCTCCTGGAACGGTGTCACCTGTGGCCATCGCTCACTGGTGGAGAGTCTGTCACTCTCTAAGCAGAATCTTGGAGGTGATGTAAGTTCAATTTCCATGCTCAAAGCTTTGAAGTGGCTTGACCTTTCAAACAACAACTTTCAAGGGATGATTCCTAATGCTTTTGGAAATTTATCCCATCTTGAATATCTTGACCTGTCTTCAAACAAGTTTGAAGGTTCAATTCCAATAGGATTTGGACGCCTCAAACGCCTCAAAACATTGAACTTTTCCAATAACATGCTGGTGGGAGAGATGCCTAAGGAACTTCAAGGCCTTGAGAGTTTGCAGGAATTTCAAATTTACAACAATCATCTGAGTGGTTTGATACCATCTTGGGTGAGGCACTGGACCAATCTGAGAGTTTTTGCTGCTTATGAGAATCATTTCAATGGAATGATTCCAGATGATCTGGGATTCATTTCTGAGCTTAAAACACTAAACCTGCATACAAACCACCTTGAAGGTCCTATACCAGCAAGCCTCTTTTCTGCATGGAAGCTACAAGTCCTGATCCTCACTCAGAACAACTTGAGTGGTGAAATTCCGGAGGAAATCGGGAACTGTCAAACCCTTCTCAGTGTTCGAATTGGAAACAATAATCTACAAGGTAACATTCCTAAGAGTGTTGGAAACCTCACTAGCCTTGCTTATTTTGAAGCTGACCATAATAATCTTTCTGGTGAGTTAGTATCAGAATTTTCTCTGTGTTATAATCTCACCTTCTTGAACCTGGCCTCAAATGGGCTTGCTGGAAAAATTTCACCAGAGTTTGGAAAGCTTATGAACCTGCAGGTGCTGATGCTTTCTGAAAATATCCTTTCTGGAGATATTCCAGAACCGATTCTGCAGATCAAAAGTCTTAAGATTGTTGACTTAAGCAATAACAGGTTCAACGGAACAATACCAAATGAAATCTGTGGCACCGCTCAGTTGCAGAAGCTGCGTTTGAATCAGAATTTCTTAAGAGGAGTGATCCCTCATGAAATCGGAAGGTGTAGAGAACTTGTTGAATTGCAGTTGGGGAGTAACGATCTGACAGGAACCATTCCCTCTCAGATTGGTCACATGCATAACTTGGAGATAGCCTTAAATTTGAGCTACAACCATCTTGAAGGAAAATTGCACCCAGAATTAGGAAGAATAAACAAACTTGGCTCTCTGGATCTTTCCAATAATAATCTCTCAGGTAAGATCCCAGAAACATTTATCAAGTTGTTGAACTTGGTTGTCGTTAACATATCAAATAATCAGCTCAGTGGTCCATTGCCAAAGTCTGCAGCATTCCTGCTCAATCCTGCTTCAAGTTATTTGGGCAACAAAGGGCTCTGCGGGGCGCCATTGAACACTACATGTGAAGATCAAGATAATCCTCATCATTATGCAGCTGTGGGAAACAATAATGGAATTTCTTACGTAACCATAATATATATACTTGGACCAATTCTTCTGGCTTTTGTGTTATTTGCTTCAACTGTCTTTGTAAACAGAATGTGTCGAAGGCAAGTACCAAATGTTCCTGAGATAATAGAAGGTGGTGAAACCGATACCAAACCATATATAATATCACGAGAAGTTTTTGCTAACAATCTAACAGAAGAAGTAGACCTTGGCGCGGTTGTTGAAGCAACTCGTGATGAATCGAATAAGGTTAGCAGTGGAAATTTCAGTGCAGTTTACAAGGCATTGATGCCCTCTGGGATAGTCTTATTTGTAAGGAAAATGTTCCCTATGGACATGACAATGATGCAGCAACACAACAAGATCGTTGCAGAGCTTCAAAGGCTTAGAAAACTGAACCATGAAAATTTAATGAAACCCGTTGGATATGTCATTTGTAATAAATTTGCTCTTCTCATTTATGAGTACATATCCCGTGGAACACTGGCTCAACTTCTTCATGAACCTGCAATGCAACCTGCATATGAGCTCGATTGGCCTGCTAGAATCTCTATTGCAATTGAAGTGGCAAATGGTTTGGGTTTCCTTCATAGTAAGACAATGATCCACCACGACATTTCTTCTAGCAATGTTCTTCTAGATGCAAATCTGAATGCACTGATCGGGGACATCGAAATATCAAAGTTCCTAGATCAAACTAAAGAAAGTTCTAGTATTATCCCATATGTTGGTTCTTTCGGTTACGTTCCACCAGAATATGCATACACAATGCAAGTGACAGAATCTGGAAATGTTTATAGCTTTGGTGTGATTCTTCTGGAGATGATAACTTCCAGAACAGCCATTGATGAAGGTGTAGAGTTGGTGAAGTGGGTTCATGAAGCTGCAGAAAGAGGTGAATCTCCAGAGGAGATAATGGATGCAACGCTTAGCTCGGAGTGCGATGGTTGGAGGAATGAAATGCTTGGTACTCTGAAATTGGCGATGCTGTGCACTGACAACAGGCCAATAATCCGACCACCGATGATCAACCTTGCGGGAATGCTTCGACAAATAAGGAACCCTGTTGATGTCTATGTCGCATGA 2691 0.4091 MVFSVMRILSLLPFLLTLFLSKSLLVDAELQEQTILFSINKNLRVPGWNATNSDYCSWNGVTCGHRSLVESLSLSKQNLGGDVSSISMLKALKWLDLSNNNFQGMIPNAFGNLSHLEYLDLSSNKFEGSIPIGFGRLKRLKTLNFSNNMLVGEMPKELQGLESLQEFQIYNNHLSGLIPSWVRHWTNLRVFAAYENHFNGMIPDDLGFISELKTLNLHTNHLEGPIPASLFSAWKLQVLILTQNNLSGEIPEEIGNCQTLLSVRIGNNNLQGNIPKSVGNLTSLAYFEADHNNLSGELVSEFSLCYNLTFLNLASNGLAGKISPEFGKLMNLQVLMLSENILSGDIPEPILQIKSLKIVDLSNNRFNGTIPNEICGTAQLQKLRLNQNFLRGVIPHEIGRCRELVELQLGSNDLTGTIPSQIGHMHNLEIALNLSYNHLEGKLHPELGRINKLGSLDLSNNNLSGKIPETFIKLLNLVVVNISNNQLSGPLPKSAAFLLNPASSYLGNKGLCGAPLNTTCEDQDNPHHYAAVGNNNGISYVTIIYILGPILLAFVLFASTVFVNRMCRRQVPNVPEIIEGGETDTKPYIISREVFANNLTEEVDLGAVVEATRDESNKVSSGNFSAVYKALMPSGIVLFVRKMFPMDMTMMQQHNKIVAELQRLRKLNHENLMKPVGYVICNKFALLIYEYISRGTLAQLLHEPAMQPAYELDWPARISIAIEVANGLGFLHSKTMIHHDISSSNVLLDANLNALIGDIEISKFLDQTKESSSIIPYVGSFGYVPPEYAYTMQVTESGNVYSFGVILLEMITSRTAIDEGVELVKWVHEAAERGESPEEIMDATLSSECDGWRNEMLGTLKLAMLCTDNRPIIRPPMINLAGMLRQIRNPVDVYVA 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00425 896 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 229 524 - -
Viun7g00425 896 SUPERFAMILY L domain-like 291 499 - -
Viun7g00425 896 SMART LRR_typ_2 209 233 IPR003591 -
Viun7g00425 896 SMART LRR_typ_2 474 499 IPR003591 -
Viun7g00425 896 SMART LRR_typ_2 89 112 IPR003591 -
Viun7g00425 896 SMART LRR_typ_2 161 184 IPR003591 -
Viun7g00425 896 SMART LRR_typ_2 113 137 IPR003591 -
Viun7g00425 896 SMART LRR_typ_2 353 377 IPR003591 -
Viun7g00425 896 SUPERFAMILY Protein kinase-like (PK-like) 616 889 IPR011009 -
Viun7g00425 896 SUPERFAMILY L domain-like 45 299 - -
Viun7g00425 896 Pfam Leucine rich repeat N-terminal domain 46 63 IPR013210 -
Viun7g00425 896 FunFam Nuclear pore complex protein NUP107 28 180 - -
Viun7g00425 896 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 692 892 - -
Viun7g00425 896 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 583 691 - -
Viun7g00425 896 ProSitePatterns Tyrosine protein kinases specific active-site signature. 736 748 IPR008266 GO:0004672|GO:0006468
Viun7g00425 896 PANTHER OS04G0122200 PROTEIN 269 846 - -
Viun7g00425 896 ProSiteProfiles Protein kinase domain profile. 613 896 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g00425 896 Gene3D Phosphorylase Kinase; domain 1 582 691 - -
Viun7g00425 896 Pfam Protein tyrosine and serine/threonine kinase 617 824 IPR001245 GO:0004672|GO:0006468
Viun7g00425 896 Pfam Leucine rich repeat 70 126 IPR001611 GO:0005515
Viun7g00425 896 Gene3D Transferase(Phosphotransferase) domain 1 692 893 - -
Viun7g00425 896 Pfam Leucine Rich Repeat 453 473 IPR001611 GO:0005515
Viun7g00425 896 Gene3D Ribonuclease Inhibitor 66 233 IPR032675 -
Viun7g00425 896 Gene3D Ribonuclease Inhibitor 234 524 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00425 Viun-Chr7 3089806 3093665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00425 1 888 Receptor kinase-like Gene Family AT2G41820 52.179 0.0 911
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Viun7g00425 PK_Tyr_Ser-Thr 4e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00425 - - vum:124827200 1347.03