Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00407 ATGCTTGGACAAGGGAATTGCCTCCTTAGATCACCATTCTTGCTATGTATAGTCATTGGATTCTTGATGCATTATTCTGTGGTGGGAACTGAGATTCCCTTGGGTTCTAAACTTTCTGTGTTTGACAATGATTATTGGGTTTCCTCCAATGGTGATTTTGCGATTGGATTCTTCAACATTTCAGATCAACCTAACCAGTTTAGTGTTGGTATTAGATTCAATTCCAAGTCTATACCATATAGTCGACAAACTGTGGTTTGGGTTGCTGGGGGTGATGTCACAGTGGGTAACAAGTCCTACTTTGAACTCACTCAAGAAGGGGAACTGGTCCTGTTTGATTCCTTGTATGGAACTTCTGTTTGGACCACCAAAACGGGTAACCGATCCGTTGCATCAGCTTCACTCCTTGACAATGGAAATCTTGTTGTAATGGACAAAGAGCAACACATCATTTGGCAAAGTTTTGAGACTCCATCTGATACTCTTCTCCCAGGACAAAGTTTATTCGCTGATAAAAGGCTTCGTGCAGCATCTGCAATCAAGAATAGCAAGTCCAGTTACTATAGTCTTCACATGAATGCATCTGGGCGTTTGGAGCTGCATTGGGAAAGTGATGTTATCTACTGGACAAGTGAAAACCCTTCTTCTGCTTCGAATCTCAGTGCTTTCCTTACAACCAGTGGAGCTCTAGAACTTCGAGACCGAAGCTTGAAACCTGTTTGGTCTGCATTTGGAGAGGATCACAGTGATTCTGTGAATTACAGATATCTTCGGCTGGATGTGGATGGAAATCTTCGCTTATATTCGTGGGTTGAAAGTTTGGGATTGTGGAGATCGGTGTGGCAAGCTGTTGAGAATCAGTGCAAGGTCTTTGCAACTTGTGGTGAACTTGGTGTCTGTATGTTCAATGCCTCAGGTGCTGCTGAATGCAAATGCCCGGTTAAGGTAAATGGGGGTAGCAAATGTTTGGTTCCATTTGAACGAGATTGTTCATCTGGAACCAATATGATAGAATACAAGAACACATATTTATATGCATTCTACCCTCCTCATAATTCTGTTATCACAAGTAATTTGGAGCATTGTCGACAGCTGTGTCTGAATGATTCACAGTGTACAGCTGCAACTTTTTCCAATGACAGAACTCCGCTATGCTCAATAAAGAAAACTGGGTATGTCACTGGTTATTCAGATCCATCTGTGAGCTCAATATCATTTATCAAGAGATGTTCAGCTCCATTTGCTGTAAATCCAAGTCTCACAAAATCTCCTCCTTCGGAACCACCTCCTCCTCTCTGTGTTCCTTGCCTAATGGGGGCTGCCACAGGCACATTTTTCATCATTGTTATTCTCCAGTTGGGAGTTTTCTTCTTCATCTACAGAAGAAAAAACTCTACAAGGCAAAAGGCCACTTTACATTTAACAACCACAAACTCAAAGGGTTTAATTGTGTTGTCCTTCTCAGAAATCAAGAGCCTCACAGGGGATTTCAAGAATCAAATTGGCACAAAGGTGTACAAGGGTTTGCTACCAAACAACCACCCGATTGCACTGAAAGACCTGAACGCAACCTTGGAAGAAAGAAAGTTCCGAAGTGCTGTAATGAAGATGGGTAGCATCCACCACAAGAACCTTGTGAAGCTGGAGGGTTATTGTTGTGAGTTTGATTACAGGTTTTTGGTGTATGAATATTGCAAAAAGGGTTCACTGGACAGGTACATAGACGATCCTGCACTATGCAAGATGCTAACATGGAGAAAGAGAGTTGAGATATGCTCAAGTGTGGCAAAAGCCATATGTTATTTGCACTCGGGGTGCAGGGAGTTCATCAGCCATGGAAATTTGAAATGTGAAAACGTTATGTTGGATGAAAACTTGGTGGCCAAGGTGAGTGAATTTGGATTTGCTATTGCAGATGGGAAGGCAACATATTGTGGCTTTTCAGCTGAGAAGGATGTAGAGGATTTTGGCAAGGTAGTTTTAACATTGTTAACCGGGTGTCGTGATCATGAACATGTTGAACTTTGTGGGTGGGCTTATAAAGAATGGATGGAAGAGAGGGTGGTGAATGTGGTTGATAGAAGAATGGAAGGAGGTTACAATTCAGAGGAACTGGAGCGTGTGTTGAGAATTGCATTTTGGTGCCTTCAAATGGATGAACGTAGAAGACCTTCCATGGGGGAGGTAGTAAGAGTTCTTGATGGAACATTGAGTGTTGATCCTCCACCACCTCCTTTTGCCTTTCAGAGGCCTTTGCAGGTAGATGATTCAGAAGAAAATGTTTCAGAGTTTGAAGTGTAG 2301 0.4237 MLGQGNCLLRSPFLLCIVIGFLMHYSVVGTEIPLGSKLSVFDNDYWVSSNGDFAIGFFNISDQPNQFSVGIRFNSKSIPYSRQTVVWVAGGDVTVGNKSYFELTQEGELVLFDSLYGTSVWTTKTGNRSVASASLLDNGNLVVMDKEQHIIWQSFETPSDTLLPGQSLFADKRLRAASAIKNSKSSYYSLHMNASGRLELHWESDVIYWTSENPSSASNLSAFLTTSGALELRDRSLKPVWSAFGEDHSDSVNYRYLRLDVDGNLRLYSWVESLGLWRSVWQAVENQCKVFATCGELGVCMFNASGAAECKCPVKVNGGSKCLVPFERDCSSGTNMIEYKNTYLYAFYPPHNSVITSNLEHCRQLCLNDSQCTAATFSNDRTPLCSIKKTGYVTGYSDPSVSSISFIKRCSAPFAVNPSLTKSPPSEPPPPLCVPCLMGAATGTFFIIVILQLGVFFFIYRRKNSTRQKATLHLTTTNSKGLIVLSFSEIKSLTGDFKNQIGTKVYKGLLPNNHPIALKDLNATLEERKFRSAVMKMGSIHHKNLVKLEGYCCEFDYRFLVYEYCKKGSLDRYIDDPALCKMLTWRKRVEICSSVAKAICYLHSGCREFISHGNLKCENVMLDENLVAKVSEFGFAIADGKATYCGFSAEKDVEDFGKVVLTLLTGCRDHEHVELCGWAYKEWMEERVVNVVDRRMEGGYNSEELERVLRIAFWCLQMDERRRPSMGEVVRVLDGTLSVDPPPPPFAFQRPLQVDDSEENVSEFEV 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00407 766 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 211 IPR036426 -
Viun7g00407 766 Pfam S-locus glycoprotein domain 249 312 IPR000858 GO:0048544
Viun7g00407 766 SMART ntp_6 331 409 IPR003609 -
Viun7g00407 766 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 461 564 - -
Viun7g00407 766 CDD B_lectin 47 158 IPR001480 -
Viun7g00407 766 Gene3D - 27 157 IPR036426 -
Viun7g00407 766 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 158 279 - -
Viun7g00407 766 ProSiteProfiles Bulb-type lectin domain profile. 31 156 IPR001480 -
Viun7g00407 766 PANTHER OS07G0415500 PROTEIN 12 747 - -
Viun7g00407 766 Pfam D-mannose binding lectin 84 177 IPR001480 -
Viun7g00407 766 Gene3D Hepatocyte Growth Factor 328 412 - -
Viun7g00407 766 ProSiteProfiles PAN/Apple domain profile. 330 410 IPR003609 -
Viun7g00407 766 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 644 741 - -
Viun7g00407 766 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 28 157 - -
Viun7g00407 766 Gene3D Phosphorylase Kinase; domain 1 459 564 - -
Viun7g00407 766 Pfam Protein tyrosine and serine/threonine kinase 504 639 IPR001245 GO:0004672|GO:0006468
Viun7g00407 766 SUPERFAMILY Protein kinase-like (PK-like) 477 733 IPR011009 -
Viun7g00407 766 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 565 643 - -
Viun7g00407 766 Gene3D Transferase(Phosphotransferase) domain 1 565 641 - -
Viun7g00407 766 Gene3D Transferase(Phosphotransferase) domain 1 642 741 - -
Viun7g00407 766 ProSiteProfiles Bulb-type lectin domain profile. 159 280 IPR001480 -
Viun7g00407 766 PIRSF SRK 637 765 IPR024171 GO:0004674
Viun7g00407 766 PIRSF SRK 5 643 IPR024171 GO:0004674
Viun7g00407 766 SUPERFAMILY alpha-D-mannose-specific plant lectins 185 279 IPR036426 -
Viun7g00407 766 ProSiteProfiles Protein kinase domain profile. 445 737 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g00407 766 SMART blect_4 37 158 IPR001480 -
Viun7g00407 766 Gene3D - 158 274 IPR036426 -
Viun7g00407 766 Pfam PAN domain 351 394 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00407 Viun-Chr7 2977777 2981007 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00407 448 762 Receptor kinase-like Gene Family AT4G21230 32.773 4.37e-41 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Viun7g00407 PK_Tyr_Ser-Thr 2e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00407 - - vun:114192568 1540.78