Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00405 ATGGCGGAATCACTTCTTTTCAGCTTCGCAGAATCGCTCCTACGAAAGCTTGCTACTGTTGCCGTTCAAGAAGCTTCTCTGGCGCTTGGTGTGCGTAGCGAGCTAAAAGAGATGACAGAAACTATGGAAATCATCAGAGGTGTCCTCTTAGATGCTCAACAAAAGACTCCGCAGAGCACTGCGTTAAGCGAATGGCTGAAACGGGTCAAGCGCGTGTTTTCTGATGCTGAAGACATAGTCGATGATTTTGAATGCGAAGCCCTTCGGAAGCACGTTGTCGACACTTCCGGTAGCCACTCAATGAAGGTACGCCATTTCTTCTCATCAAGTAATCCTGTTGTTTATCGTCTTAGAATGGCTCATCGCATTCAAGACATCAACACCAGGTTGGCCAAACTTGCAGATCAAAGAAACATGTTTGGCCTCCAAATCATTAATCAAGATATGCGTGTCGTGCGCGTGAGAGAAATGACACATTCTTATGTAAACCCTACCAAGGTTACTGGAAGGGAACATGATAAGAATGAAATAGTAAAGCTTTTGGTGCAAGATGGTCATCACAAAAGTCTTTCTGTTATTCCCATTGTGGGAATGGGAGGCTTGGGAAAAACCACACTTGCTAAGTTGGTCTTCAATGACACCAACATTCATGCATGTTTTCCCTTGAAGATGTGGGTCTGTGTTTCTAATGATTTTGAACTTAGGAATCTACTCGTCAAAATTCTTAATTCTATTCCAAGCCCAACTAGTGAAAACTTCAATAACTTTGAGACAGAGCAACTTCAAATTCATTTGAGGAATAAACTTGAAGATCAAAAGTTCTTGCTTGTGTTGGATGACGTGTGGAACGAGGATCCTGCAAGATGGCATGATTTGGAGGAAATAATAGATTTGGATGTAAAGGGGAGTAAAATCCTAGTGACCACTCGTAGCCATGCAGTAGCTTCCATAATGCATACTAAATCCTCAAATTCGTACCTTCTTGAATGTCTATCTGAAGAGGATTCTTTGTCTCTATTTGTGAAATGTGCTTTTGAAGATGGAGAGGAGAAGAAACATCCAGAACTATTGGAGATTGGGAAAAAAATCGTAGAAAAATGTGTAGGGTTACCGTTGGCACTGAGAACGGTGGGGAGTTCATTGTTCCGGAATGTTGATAAGAAAGAGTGGGAGTCTGTAAGAGACAATGAGATTTGGAATCTACAAAAAAATGAAACAGGCATTTTGCCTGCTCTCAAACTAAGCTACGATCAACTGCCTTCGTATTTAAAACCATGTTTCACTTCTTTTTTCCTTTATCAATTTGATGTTAATATTTTTTGTTATGATCTTACTACGGTGTGGGATTCACTTGGTTTTCTTCCACTACCAAAGGAAGGTGAATCAATGAGTGATGTTCTCAATAAGGTTTTGTGTGAACTAAGGACGAGATCGTTTCTTTCCGATGATCTTGACTTTGGGATTGATAATGTCTATGAGATTCACGATTTGGTATCTGATCTTGCAGTATATATTGGGAAAGGTGAGTTTGAAAGAGTAAATCGCCGCAATCCAAAAATATCAGAGAATGCTCAACATTTGGTATTTGAGGAAAATAGCTTTTATGGTGAAGATCTTCTCCCCACCGGTCTCAGATCTGTTGTTTTTCGTGACGGGGGGAGCAATATAGATTTCTTGAATGCATTGGTGTCAAGGTGCAGATACTTGAGGATTTTAGACTTACGATATTCCGAATACGAGAGTTTGCCTCACTGTATCGGAAAGTTGAAACATTTAAGATTTCTGTGTCTTGCAAAGAATGAAAAACTTAAGGAACTTCCTGATTCAGTCTGCAAACTTCAAAATTTGAAAACTTTAGTCCTTAGTGGATGCATAAGGCTACAAAAGTTACCCAAAGGAATAAAATATCTAATTAGCCTTCGTCACTTGGCAATAACCACTGCACAAACTGATTTTTCAGAAGAAGAGATTGCAAATTTCACTTCTTTAGAAAATTTATCTTTTACTCAATGTGATAATTTGGAGTCATTGTTCGAAGAAGTACAACTTTCAACACTTCAAACTTTGACTTTGATTGACTGTGGAAATCTAAAGTCTGTGTCGCTCCATTGCATCAGAAATTTAGAGGCTTTAACGATCATCAATTGTAACAAGTTGGAAAGCCTTAGCTGCCAAATCCCCGAGTTAAAGTTAAAGTATCTTTTTCTTTTTGACTTGCCACTACTAGTCAAATTGCCTCAGTGGTTTCAAGGATCTGCGAACTCTTTACAACACTTAGCAATTAGAAATTGCGTCAATCTTGGTGAACTTCCTGATTGGCTACCAACTCTAATTTGTCTCAAAGTACTTGAAATTAGCGATTGTCCAAAACTATTGTCACTCCCTGATAACATTCATCACCTTACAAATCTTGAAAAATTAGACATTACTGGTTGTCCTGAATTACGCAAAAGATTCAAGCCAAAAGTTGGACAAGATTGGCACAAGATATCACACATCAAACAAGTTGACATTGATGATTCAGATGATGAAGAAGATTTATCCGAATAA 2550 0.3875 MAESLLFSFAESLLRKLATVAVQEASLALGVRSELKEMTETMEIIRGVLLDAQQKTPQSTALSEWLKRVKRVFSDAEDIVDDFECEALRKHVVDTSGSHSMKVRHFFSSSNPVVYRLRMAHRIQDINTRLAKLADQRNMFGLQIINQDMRVVRVREMTHSYVNPTKVTGREHDKNEIVKLLVQDGHHKSLSVIPIVGMGGLGKTTLAKLVFNDTNIHACFPLKMWVCVSNDFELRNLLVKILNSIPSPTSENFNNFETEQLQIHLRNKLEDQKFLLVLDDVWNEDPARWHDLEEIIDLDVKGSKILVTTRSHAVASIMHTKSSNSYLLECLSEEDSLSLFVKCAFEDGEEKKHPELLEIGKKIVEKCVGLPLALRTVGSSLFRNVDKKEWESVRDNEIWNLQKNETGILPALKLSYDQLPSYLKPCFTSFFLYQFDVNIFCYDLTTVWDSLGFLPLPKEGESMSDVLNKVLCELRTRSFLSDDLDFGIDNVYEIHDLVSDLAVYIGKGEFERVNRRNPKISENAQHLVFEENSFYGEDLLPTGLRSVVFRDGGSNIDFLNALVSRCRYLRILDLRYSEYESLPHCIGKLKHLRFLCLAKNEKLKELPDSVCKLQNLKTLVLSGCIRLQKLPKGIKYLISLRHLAITTAQTDFSEEEIANFTSLENLSFTQCDNLESLFEEVQLSTLQTLTLIDCGNLKSVSLHCIRNLEALTIINCNKLESLSCQIPELKLKYLFLFDLPLLVKLPQWFQGSANSLQHLAIRNCVNLGELPDWLPTLICLKVLEISDCPKLLSLPDNIHHLTNLEKLDITGCPELRKRFKPKVGQDWHKISHIKQVDIDDSDDEEDLSE 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00405 849 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 428 IPR027417 -
Viun7g00405 849 Gene3D - 150 324 IPR027417 -
Viun7g00405 849 FunFam Probable disease resistance protein At1g61300 149 323 - -
Viun7g00405 849 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 742 817 IPR039203 GO:0050832
Viun7g00405 849 Gene3D - 330 420 IPR042197 -
Viun7g00405 849 Pfam Rx N-terminal domain 10 98 IPR041118 -
Viun7g00405 849 SUPERFAMILY L domain-like 494 816 - -
Viun7g00405 849 CDD RX-CC_like 8 135 IPR038005 -
Viun7g00405 849 Gene3D Ribonuclease Inhibitor 731 827 IPR032675 -
Viun7g00405 849 Gene3D Ribonuclease Inhibitor 543 730 IPR032675 -
Viun7g00405 849 Gene3D - 10 124 - -
Viun7g00405 849 Pfam NB-ARC domain 171 417 IPR002182 GO:0043531
Viun7g00405 849 PRINTS Disease resistance protein signature 799 815 - -
Viun7g00405 849 PRINTS Disease resistance protein signature 268 282 - -
Viun7g00405 849 PRINTS Disease resistance protein signature 367 381 - -
Viun7g00405 849 PRINTS Disease resistance protein signature 192 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00405 Viun-Chr7 2920313 2923247 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00405 193 815 WRKY Transcription Factor Family AT5G45050 22.958 4.23e-13 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00405 - - vra:106771654 1120.15