Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00403 ATGGTCGAATTACTTCTTTTCAGCTTCGCAGAATCGCTCCTGAGTAAGCTTGCTTCTGGTGCCGTTCAAGAAGCTTCTTTGGCGCTTGGTGTTCATGGCGAGCTACAACAGATGCAAGCAACTATGGCACTCATCAGAGGTGTGCTCTTGGATGCTGAGCAAAAGAATCCGCAGAGCAATGCGCTGGGCGAATGGCTGAGACAGATAAAGCAAGTTGTTTCTGACGCTGAAGACATAGTCGATGATTTTGAGTGCGAAGCGTTGCGGAAACACGTTGTCAACACCTATGGTGGCTGCTCAAGGAAGGTACGCCGTTTCTTCTCAACAAGTAATCCTCTTCTTTATCGGCTTAGAATGGCACATCAAATTCAAGACATCAACACAAGGTTGGCCACACTTGCAACTCAAAGAAGCATTTTTGGCCTTCAAGTCATTGACCAAGATACACGCGTCGTTCACGTCAGGGAAATGACTCATTCTCATGTAAAACCTTCCAGTATTACTGGAAGGGAACATGATAAGAATGAAATAGTAAAATTGTTGGTGCAAGATTGTGATCACGAAAGTCTTTCTGTTATTCCCATTGTAGGAATGGGAGGTTTGGGAAAAACCACACTTGCTAAGTTGGTCTTCAATGACACCACCATTCATGCATGTTTTACATTAAGGATGTGGGTATGTGTCTCTAATGATTTTGAACTTAAGAGTGTGCTTATTAAAATCCTCAACTCTGCTCCAAACCCAACTAAGGAAAACTTCAATAGCTTTGAGATAGAGCGACTTCAAAATCATTTGAGGAATAAACTTGAAGATCAAAAGTTCTTGCTTGTGTTAGATGACATGTGGAACGAGGATCCTGCAAGATGGGATGAGTTGAAGGAAATAATAGATTTGAATGTTAAAGGGAGTAAAATTTTAGTGACTACTCGTAGCCATGCAGTAGTTGCTGCGATGCGCACTAAATCCTCAAATTCGTACCTTCTTAAATGTCTCTCTGAAGAGGATTCTCTTTCTCTATTTGTGAAATATGCTTTTGAAGTTGGAGATGAGAAACAACATCCACAACTCTTGAAGGTTGGGAGGAAAATCGTGAAAAAATGTGGAGGATTACCGTTAGCAGTGAAAACGTTGGGGAGTTCACTATTCTCGAAATTTGACAAGAAAGAGTGGGAGTGTATAAGAGACAATGAGATCTGGAATTCAAAACAAAATGAAAAAGGCATTTTGCCTGCTCTCAAATTAAGTTATGATCAACTGCCTTCATATTTAAAACCATGTTTTGCTTCTTTCTCCCTTTTCCAACAGGATACCCATATTTCAGCTGTTGACGTTTCTATGTTGTGGGGAGCACTTGGTTTTCTTCCACCATCAAAGCAAGTGTTTGTTGGGAAAGGTGAGTTTGAAAGAATAGATCACAGCAATCCAAAAATATCCGAGAACGTCCAACATTTGGCATTTGAGGAAAATAATTTTATGGTGAAACTCTTCCCCCCACTAATCTCAGAACTCTCATTTTTCGTAATGGAGTGA 1530 0.4059 MVELLLFSFAESLLSKLASGAVQEASLALGVHGELQQMQATMALIRGVLLDAEQKNPQSNALGEWLRQIKQVVSDAEDIVDDFECEALRKHVVNTYGGCSRKVRRFFSTSNPLLYRLRMAHQIQDINTRLATLATQRSIFGLQVIDQDTRVVHVREMTHSHVKPSSITGREHDKNEIVKLLVQDCDHESLSVIPIVGMGGLGKTTLAKLVFNDTTIHACFTLRMWVCVSNDFELKSVLIKILNSAPNPTKENFNSFEIERLQNHLRNKLEDQKFLLVLDDMWNEDPARWDELKEIIDLNVKGSKILVTTRSHAVVAAMRTKSSNSYLLKCLSEEDSLSLFVKYAFEVGDEKQHPQLLKVGRKIVKKCGGLPLAVKTLGSSLFSKFDKKEWECIRDNEIWNSKQNEKGILPALKLSYDQLPSYLKPCFASFSLFQQDTHISAVDVSMLWGALGFLPPSKQVFVGKGEFERIDHSNPKISENVQHLAFEENNFMVKLFPPLISELSFFVME 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00403 509 Pfam NB-ARC domain 170 417 IPR002182 GO:0043531
Viun7g00403 509 Gene3D - 10 124 - -
Viun7g00403 509 Gene3D - 149 324 IPR027417 -
Viun7g00403 509 CDD RX-CC_like 8 134 IPR038005 -
Viun7g00403 509 Coils Coil 66 86 - -
Viun7g00403 509 PANTHER DISEASE RESISTANCE PROTEIN RP 49 464 IPR044974 GO:0006952
Viun7g00403 509 FunFam Probable disease resistance protein At1g61300 149 323 - -
Viun7g00403 509 Gene3D - 330 420 IPR042197 -
Viun7g00403 509 PRINTS Disease resistance protein signature 192 207 - -
Viun7g00403 509 PRINTS Disease resistance protein signature 268 282 - -
Viun7g00403 509 PRINTS Disease resistance protein signature 367 381 - -
Viun7g00403 509 Pfam Rx N-terminal domain 10 99 IPR041118 -
Viun7g00403 509 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 428 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00403 Viun-Chr7 2899221 2902274 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00403 190 455 WRKY Transcription Factor Family AT5G45050 27.407 1.37e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00403 - - vun:114190424 985.326