Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00401 ATGCCTAAAGTCATGGCCGAATCACTCATTTTCGCGGTTGCAGAATCACTCATAAGCAAGCTCGCTTCTCGAGCTGTCGAACAAGCTTCTTTGGCCTTGGGTGTGTACCAAGAGCTACAGCAGATGAAAAAGACCATGGCACTGATCAAAGCTTTTCTGTTAGACGCTGAGCAGAAGAAGGAGAAAAACAATGCCCTGAGTGAGTGGCTGAGACAGATTAGGCTGGTGTTCGCCCACGCCGAAGACATAGTCGACAACTTCGAATGCGAAGTGTTGCGGAAGCACGTTGTCAGAACTCACGGCAGCTTCTCCAGGAAGGTATGTCGTTTGTTTTCAACCAGTAATCCTTTGGTTTACCGTTACAGAATGGGGCGTGAGATAAACGACATCAAGAAGCAGTTAGAGAAGGTTGCAGCTGATGGGCACATGTTTGGTCTTCAAAGCAGTGACAAAGATACAAAGGTTTTGCATGCGAGGGAAATGACTCATTCACATGTAAATGTCTCAAATGTTGTAGGGAGAGAGCATGATAAGCAGAAGATAATAGAGCTTTTGCTGCAAGATGATCATCGTGACAGAAGTCTCTCAGTGATTTCCATTGTGGGATTTGGAGGCTTGGGAAAGACCACTCTCGCAAAGGTAGTGTTCAATGACACCAAAGTTGAGGAATTTTTCACTTTGAAGATGTGGGTGTGTGTCTCTAATGATTTTGAACTTAGGAATGTGCTTATCAAAATCCTCAACTCTGCTCCCAGTGCCACCAATGAGAAGTTCAAAAATTTAGAGACGGATCAACTTCAAATTCGTTTGAGAAATACCCTTCAACGTGAGAAGTTTTTGCTCGTCTTAGACGATGTGTGGAACGAGAATCGTGTTAAATGGGATGCGTTGAAGGAAATCATAGACATGGTAGGTAACAGAGGAAGCAAAATCTTGGTGACTACTCGTAGTCACTCAATAGATGCCATGATGCGCACTAAATCCTCTAACTCTTACACTCTCAAAGGCCTTTCTGAAGAGGATTCCTTGTCTCTGTTTGTCAAATCTGCTTTTGATGATGGAGAAGGGAAAAAGCATCCAGAGTTGATGGAGATTGGGAGACAAATTGTGAGAAAATGTGGAGGAATACCATTAGCAGTGAGAACCTTAGGAAGTTCACTATTCTCAAGGGTTGATAGAAAAGAGTGGGAGAGTATAAGAGACAATGAGATTTGGAACTTAAAACAAAATGAAAATGACATTTTGCCTGCTCTTGAGTTAAGTTATGATCAACTACCTTCGCATTTGAAACGATGTTTTGCTTGCTTCTCTCTTGCCTCGAAGGACTTTGATGTTTCAAGTTCTTACGTTGCTCTGCTGTGGGAGGCACTTGGGTTTCTTCCCCCACCAAAGGAAAATGAAACAACACATGATGTTGCTAATGAATATTTGCGTGAGCTATGGTCAAGATCGTTTCTCACAGATTTTCTTGACATGGGGAGCACATGCAGATTTAAATTACATGATTTAGTCCGTGAGCTTGCAGTGTATGTAGCCAAAGGTGAGTTTCAAATACTGTATCCTCACAGTACAACTATATCTGAGCATGCCCAGCACTTGTCATTCATTGAAAATGATATGCTTGGCCAAGATCTCGTTCCCATGGGTCTAAGAACTATAATTTTTCCCATGGAAGCTACGAATGGTGCTTTCTTGAATACGTTGGTGTTCAGGTGCAAATACCTCAGAGTTCTGGACTTGAGTTATTCTGAATACGAGAGTTTGCCTAGCTACATTGGAAAGTTGAAACATTTGAGATATCTCAGTCTTTCAGGTAATAAAAAACTTAAGGGACTCCCAGATTCCGTATGCAAACTCCAGAATTTGCAAACGTTGGACCTAAGAGGTTGCATACAGCTGCAAAAACTGCCCAAAGGAATAAGAAAGTTGATCAGCCTTCGTCGTCTGCTTGTAACCACTATGCAACCAGACTTTCCAGACAAAGAAATTTCAAAATTGGCTTCTATAGAAACATTAGAACTCTATTCTTGTGATAATCTGGAGTCATTGTTCCAAGCTATACAACCCAGAAGTCTTAAGTTTTTGCATCTTTCTGGTTGTGGGGGTTTAAGGTCTCTGTCCTTTCATGTCATTACAAATTTAGAGAGTCTGGTTATCTTCAAATGCAGTAAGATGGAATTGTCAATGGGCCTTAGCAACCTTAATTCCATTCCTGATTCAAGGCTGAAATTACTTGTTCTACAAAGTTTGCCACAGTTGGTCACTTTGCCTGAGTGGTTGCAAGGATCTGTGAACACACTGCATTCCTTGTTAGTTGTTGACTGCAACAATCTTGAGGAGCTTCCTGAGTGGCTGTCAACTTTGACCTGTCTCAAACTACTTATAATTGAACATTGTCCAAGGTTGATCTCACTCCCTGAGACCACGCATCTCCTCCGAAACCTTGAACATTTGGAAATCAATGATTGTCCTGAATTATGCAGAAGATGCCAGCCAGGAGTTGGACTGGATTGGCACAAAATATCCCACATCAAGCAAGTTATAATTGGTGAACCAGAAGAGTAG 2565 0.4183 MPKVMAESLIFAVAESLISKLASRAVEQASLALGVYQELQQMKKTMALIKAFLLDAEQKKEKNNALSEWLRQIRLVFAHAEDIVDNFECEVLRKHVVRTHGSFSRKVCRLFSTSNPLVYRYRMGREINDIKKQLEKVAADGHMFGLQSSDKDTKVLHAREMTHSHVNVSNVVGREHDKQKIIELLLQDDHRDRSLSVISIVGFGGLGKTTLAKVVFNDTKVEEFFTLKMWVCVSNDFELRNVLIKILNSAPSATNEKFKNLETDQLQIRLRNTLQREKFLLVLDDVWNENRVKWDALKEIIDMVGNRGSKILVTTRSHSIDAMMRTKSSNSYTLKGLSEEDSLSLFVKSAFDDGEGKKHPELMEIGRQIVRKCGGIPLAVRTLGSSLFSRVDRKEWESIRDNEIWNLKQNENDILPALELSYDQLPSHLKRCFACFSLASKDFDVSSSYVALLWEALGFLPPPKENETTHDVANEYLRELWSRSFLTDFLDMGSTCRFKLHDLVRELAVYVAKGEFQILYPHSTTISEHAQHLSFIENDMLGQDLVPMGLRTIIFPMEATNGAFLNTLVFRCKYLRVLDLSYSEYESLPSYIGKLKHLRYLSLSGNKKLKGLPDSVCKLQNLQTLDLRGCIQLQKLPKGIRKLISLRRLLVTTMQPDFPDKEISKLASIETLELYSCDNLESLFQAIQPRSLKFLHLSGCGGLRSLSFHVITNLESLVIFKCSKMELSMGLSNLNSIPDSRLKLLVLQSLPQLVTLPEWLQGSVNTLHSLLVVDCNNLEELPEWLSTLTCLKLLIIEHCPRLISLPETTHLLRNLEHLEINDCPELCRRCQPGVGLDWHKISHIKQVIIGEPEE 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00401 854 PRINTS Disease resistance protein signature 273 287 - -
Viun7g00401 854 PRINTS Disease resistance protein signature 197 212 - -
Viun7g00401 854 PRINTS Disease resistance protein signature 373 387 - -
Viun7g00401 854 PRINTS Disease resistance protein signature 617 633 - -
Viun7g00401 854 SUPERFAMILY L domain-like 499 847 - -
Viun7g00401 854 Gene3D Ribonuclease Inhibitor 561 687 IPR032675 -
Viun7g00401 854 Gene3D - 427 509 IPR036388 -
Viun7g00401 854 Gene3D - 336 426 IPR042197 -
Viun7g00401 854 Pfam Rx N-terminal domain 14 100 IPR041118 -
Viun7g00401 854 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 435 IPR027417 -
Viun7g00401 854 CDD RX-CC_like 12 138 IPR038005 -
Viun7g00401 854 FunFam Probable disease resistance protein At1g61300 153 329 - -
Viun7g00401 854 Pfam NB-ARC domain 175 423 IPR002182 GO:0043531
Viun7g00401 854 Pfam Leucine rich repeat 574 630 IPR001611 GO:0005515
Viun7g00401 854 Gene3D Ribonuclease Inhibitor 690 832 IPR032675 -
Viun7g00401 854 Gene3D - 153 330 IPR027417 -
Viun7g00401 854 Gene3D - 14 128 - -
Viun7g00401 854 PANTHER DISEASE RESISTANCE PROTEIN RP 39 754 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00401 Viun-Chr7 2891762 2895408 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00401 180 826 WRKY Transcription Factor Family AT5G45050 24.490 1.98e-17 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00401 - - gmx:100780033 1326.23