Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00398 ATGGCCGAATCACTTCTTTTCAGCTTCGCAGAATCACTCATAGGGAAGCTTGCTTCTGGAGCCGTTCATGAAGCTTCTCTTGCTCTCGGTGTGCACGCAGATCTTCAACAGATGGAAGAGAGCATGTCACTCATCAGAGCATTCCTATTAGACGCTGAGCAAAAGAAGCCGCTGAACAATTCATTGAGTGAATGGCTGAGACAGATCAAGCAAGTGTTCTCCGACGCAGAAGACATAGTTGATGATTTCGAGTGTGAAGCGTTGCGGAAGCACGTTGTCAACACTCACGGTGGCCTCACAGGGAAGGTACGTCGCTTTTTCTCAACCAGTAATCCTCTCATTTACCGAATCAGAATGGCACATGAGATAAAAGACATCAAGGAGAGGTTGCAGAAAGTTGCAGCTGATGGGAACACGTTCGGCCTTCAAATCATTGATCAAGATACACGTGTCGTTCATGTGACGGATACTACTCATTCCCACGTAAACCCTTCCAACGTTGTTGGAAGACAACATGAAAAACAGGAAATACTAAACCTTTTACTACAACATGGTCATGGCGAAAGTCTCTCGGTTGTTTCCATTCAGGGTTTCGGTGGTTTGGGAAAGACCACACTGGCAAAGTTGGTGTTCAATGACACCACCATTGACGAGTGTTTCCCGTTGAAGATGTGGGTGTGTGTCTCTGGTGATTTTGAGCTTAGGAATGTGCTTATTAAGATTCTCAATTCTGCTCTAAACCCAACTAACGAAAACTTCAAAAACTTTGAGACGGAGCAGCTTCAAAATCGTTTGAGAAGCACACTTCAACGCCAGAAGTTCTTGCTTGTGCTGGATGATGTGTGGAACGAGTATCAAGCTAGATGGGATGATTTGAAGGAAATATTAGATGTAGGTGTTGAAGGGTGTAAAATCATAGTGACAACTCGTAGCCACAAGACAGTTACCATTATGTGCACCAAATCCTCCAACTCTTACCTTCTAGAACGCCTTTCTGAAGAGGATTCCTTCTCTTTATTTGTCAAAACGGCTTTTAAAGAAGGGAAAGAGGAAAGATATCCACAGTTGCTGGAGATTGGGAAGGAAATTGTGAACAAGTGTGGAGGAATACCATTGGCAGTGAAAACCTTAGCGAGTTCACTGTTCTCTGTGGTTGATAAAACCAAGTGGGAAGCTATGAGGGACGATAAGATTTGGAATTTGCCACAAAAAGAAAAGGACATTTTGCCTGCTCTTGAGATAAGTTACAATCAACTTCCTTCACATTTGAAACCCTGTTTTGTTTGCTTCTCCCTTTTCGGTGAGGGTTCTGAATTTGTCAGCTTTTATGTTGCTAAGTTGTGGGAGGCACTTGGTTTTCTTCCACCACCAAAGGAAAATGAGACAATGCATGATGTTGCCATTCAATTTCTGCGTGAGCTTTGGTCAAGATCTTTTCTCACAGATTTCATTGAACTGAGCCATTGCTACATTTTTAAATTACATGATTTAGTGCATGATCTTGCTATGTATGCTGCCAAAGGTGAGTTTCAGACAATATACCCCCGCAGTTCAAAAATATCTCCCAATGCTCGACATTTGGCATTCAGTGATAATAATCTGCTAGACCAAGCTGTTCTTCCAACAGGTCTGAGAACTATAATTTTTCCTGATGAAGCCACCAATGAAGCTTTCTTGAACACATTGGTGTCAAGGTGCAAATACTTGAGGTTTTTGGAACTGAGTAACTCTAAATACGAGACTTTACCTCGGTCCATTGGAAAGTTGAAACATTTAAGATATCTCTGTCTCTTTGGGAATAAAAACCTTAAGGGTCTCCCTTGTTCAGTATGCAACCTGCAAAATTTGGAAAATTTGAACCTTAATGAATGCACAGAGCTACAAGAATTGCCCAAAGGAATAAGCAAACTTATCAGCCTGCGTCAGCTGCATATAACCACAAAGCAACTTCATTTTCCAGACCAAGAAATCTCAACTTTGACTTCTTTAGAGACTTTAACATTCAACTCTTGTGATAATTTGGAGTCATTGTTGAAAGGGATACAACTTTCTAGTCTTACAAATTTGTCTTTGCATGACTGCGGGAAACTGAAGACTTTGTCCTTTCATGTCATAGCAAATTTGGAGCATTTGCTTATCGACAATTGTTGTGAGTTGGAATTGTCAATGGGCTTTGGCAATGGCAACCAAATCCCTGATTTAAGGTTGAAGTCTCTTGCTTTTAAAAGTTTGCAACAGTTGGTCACTTTGCCTCAGTGGTTGCAAGGATCTGTGAACACTCTGCATTCTTTGGTGATTGCTGACTGCAACAATCTTAAAGAGCTTCCTAAGTGGCTTTCATCTGCGGTTTTTCTCAAACTGCTTGTAATTGAATACTGTTCATCCCTGCAGTCACTCCCTGATAACCTCATAAATCTTGAAAATTTACTGATTAATAGCTGTCCTGAATTATGCAAAAGATATCAGCCGGGGGTTGGACAGGATTACCACAAAATATCTCACATCAAAAAAGTTTTTGTTGGTGAATTGGAAGAGTGA 2538 0.4117 MAESLLFSFAESLIGKLASGAVHEASLALGVHADLQQMEESMSLIRAFLLDAEQKKPLNNSLSEWLRQIKQVFSDAEDIVDDFECEALRKHVVNTHGGLTGKVRRFFSTSNPLIYRIRMAHEIKDIKERLQKVAADGNTFGLQIIDQDTRVVHVTDTTHSHVNPSNVVGRQHEKQEILNLLLQHGHGESLSVVSIQGFGGLGKTTLAKLVFNDTTIDECFPLKMWVCVSGDFELRNVLIKILNSALNPTNENFKNFETEQLQNRLRSTLQRQKFLLVLDDVWNEYQARWDDLKEILDVGVEGCKIIVTTRSHKTVTIMCTKSSNSYLLERLSEEDSFSLFVKTAFKEGKEERYPQLLEIGKEIVNKCGGIPLAVKTLASSLFSVVDKTKWEAMRDDKIWNLPQKEKDILPALEISYNQLPSHLKPCFVCFSLFGEGSEFVSFYVAKLWEALGFLPPPKENETMHDVAIQFLRELWSRSFLTDFIELSHCYIFKLHDLVHDLAMYAAKGEFQTIYPRSSKISPNARHLAFSDNNLLDQAVLPTGLRTIIFPDEATNEAFLNTLVSRCKYLRFLELSNSKYETLPRSIGKLKHLRYLCLFGNKNLKGLPCSVCNLQNLENLNLNECTELQELPKGISKLISLRQLHITTKQLHFPDQEISTLTSLETLTFNSCDNLESLLKGIQLSSLTNLSLHDCGKLKTLSFHVIANLEHLLIDNCCELELSMGFGNGNQIPDLRLKSLAFKSLQQLVTLPQWLQGSVNTLHSLVIADCNNLKELPKWLSSAVFLKLLVIEYCSSLQSLPDNLINLENLLINSCPELCKRYQPGVGQDYHKISHIKKVFVGELEE 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00398 845 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 429 IPR027417 -
Viun7g00398 845 FunFam Probable disease resistance protein At1g61300 150 322 - -
Viun7g00398 845 Gene3D - 10 124 - -
Viun7g00398 845 CDD RX-CC_like 8 134 IPR038005 -
Viun7g00398 845 PRINTS Disease resistance protein signature 192 207 - -
Viun7g00398 845 PRINTS Disease resistance protein signature 367 381 - -
Viun7g00398 845 PRINTS Disease resistance protein signature 611 627 - -
Viun7g00398 845 PRINTS Disease resistance protein signature 268 282 - -
Viun7g00398 845 Pfam NB-ARC domain 171 417 IPR002182 GO:0043531
Viun7g00398 845 SUPERFAMILY L domain-like 485 819 - -
Viun7g00398 845 Gene3D Ribonuclease Inhibitor 682 824 IPR032675 -
Viun7g00398 845 Gene3D Ribonuclease Inhibitor 483 681 IPR032675 -
Viun7g00398 845 PANTHER DISEASE RESISTANCE PROTEIN RP 38 769 IPR044974 GO:0006952
Viun7g00398 845 Gene3D - 330 420 IPR042197 -
Viun7g00398 845 Gene3D - 150 323 IPR027417 -
Viun7g00398 845 Pfam Rx N-terminal domain 11 92 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00398 Viun-Chr7 2857860 2861183 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00398 190 806 WRKY Transcription Factor Family AT5G45050 24.179 2.26e-12 69.3