Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00387 ATGGAGAGTGGAGGCAAGATGGAAGACTATGAAGTGATTCAGCAAATTGGAAGAGGAGCACTTGGTGCAACTTTTCTTGTTCTGCACAAGACTGAGAAAAAGAGGTATGTGCTGAAGAAAATTCGCTTGTCCAAACAAGCTGACAAATCCAAAGTGACAGCACAACAAGAGATGGACCTGATAGCTAAACTAAATTACCCTTATATTGTGGAGTACAAAGATGCTTGGGTGGAGAAGGAGGATTGCATATGCATTATAACCGGCTATTGCGAAGGGGGTGACATGGCTGCAAATATAAAGAAAGCTCGGGGATCTTATTTTTCGGAGGAGAAAGTCTGCAAATGGTTGACTCAGTTGTTACTAGCTGTGGACTACCTTCACTCCAATCGGGTACTCCACAGAGATCTTAAGTGTTCCAACATATTCCTTACCAAAGAAAATAACATTCGGCTAGGTGAATTTGGTCTTGCGAAGCTTCTCAATCCTGAAGACCTCACTTCTCCGGCTTTTGGAACTCTAAACTACATGTGTCCCGAGGCCTTTGCTGGTATGCCTTACGGTTATAAATCTGATATGTGGTCACTTGGTTGCTGCATGTTTGAAATTGTTGCACATCAACTAGCATTTCGTGCTCCAGACAGGGCTGGACTTATCAATAAAATAAATAGATGCTCCATTTCTCCACTGCCAATTGTTTACTCGTCCACACTGAAACAACTTATCAAGAGCATGCTGAGGAAAAACCCAGAACACAGACCAACAGCATCTGAATTATTAAGGCATCCTCATTTACAACCTTATGTTCTACGCTGTCGTAATGCCTCATCTATTTACCTACCAGTACATCTTATAAATAGCAACTCCCCAAAGGATAAAACTAAAAACAAATCTAGTGGTAGCAAAGACCATTGGGACAAGGAAGCAGAATTAGCAGGATTAGTCAATCGTCTGGACCGAATTTATCCATTTCAGGGAAACGCAGATGTACAGACACGGAACCAGCATAATGAGGGCAAGGTAGCAGTGCCAACCAAAGACAATGTTGAGACCAAAATGGTTGATTCTACCAGCTACACTCAGGAATTTTCTACAAGTATTAGCGGCTCGAAAGATGGCTCTACAACATCTGAATCAACTGTTTGCAGTGTGAGCAAGGAAGGAGACTTTAAAAATAGATTTGCAAGGGACACAGCTGACAGTGAGATCACTTCCAAAAGTACAATAGATTGTGTGCATGAAGAACAAGGACTTACCACCCAAAAGTCATGCGCAATTGACATAAATACAGTAATTAAAAATGTTGAAGATATTCTTTCCAAAGAAGATCTCAATACAGATGAAGCACTGAGTGAAGATGCCAAACCTAGGGATTACAGTAAATCCACATTATCCAGTGAAGGCAGCGAGAGTAATGATAAAGTTGAGTCCATTGATGAGATCATGTCAAAGAGTACCCTTGATTCTGTGCATGAAGAACATAGATTTACGGTGGATCATTTTCAGAAGTTGGATGTGATTGACCTAAGCACAGTATCTACAGAAGTTGAAGACAATTTTTCAAGTGAAGGTTTTGATAAAAAGGAAACAGATATGGAAAATGACAAACCTGAGGACTCCAGAAAATCAATAGTGTTCATTGAAAACATCGAAGGTAATGATAATCATGTGTCCATTGATGAGATCACTTCAAAGGGTATTCTAGAATCTGTGCATGATGAACAGGAATTTACTGCTGAACATTTTCCAGAGTCAGATGTCATTGACACGAATTCAGTGGCTACAAAATTTGAAGATAATTTTCGCACTGAAGCATTTGACCAAACTGAAACAGAGACGAAAAATGGCGAACAGGAGGAGTCCAGAATATCAGTAGTGTCCAATGAAAACATGGATGGTGATGATAATGATAGGTTCATTGATGAGATCGGATTGAAGAGTACACTCGATTCTGTGCATGAAGAGCAATGGCTTGTAGCTGAACCTGCTCAAAAGTTAGATCTTGTTGACATAAAAGCCACAGCTTCAAAAGATGTGGACAAAGTTTCTAATGAAGGTTCTGGTGGAGCTGAAGCACAGAGGGAAGATGCCAAACTTGAGTGCTCCAGTAAATTAATAATTTCCCATGATAATAGCAACGGTAATGATGAAGATGGATCTGGTGGTGAGATCACATCAAAGAGTGTGCTAGAATCTGTTGGTGAAGAACAAGGACTCACTGCTGAGCATTTTCAGACGTCTGATGCAATTGACTTAAATGCAGTGACTACAGAATTTGAAGATAAACTTTCCAGTGAAGGTTTTGATAAAGCTGAAACACAGGAGAAAGATGCTAAACCTGAGGACTCCTTTAAATCTTTGTCCAGTGAAGGCAGCAGCAGCAGTGATAAAGAAGGGTCCATTGATGAGGAAATTGCATCATCCCCAATGGCACAACCTGTGAAGGTTGAACATGACACTGAAACTGGAAGCAGCTTGAAGGAAGATGAAAATCCTGAAGCATTTGAAGAAGGCTCACTCATGAACAGCTTGACTTCTGATACTAAGGACACTTATCCTGTTAAGGATGAAAACAGAGAAGACACACACACAATCAGTTGCTCAACGTGTAATGAAGACAACAATGCTGTTGTAACCCAGAAGCAAGCAAATGGAATATCATCAATGAAGCGTATTTCAAGAGGCAGTAATGCTTCTTGCCAGCAAAGAGCTGATGCTCTGGAATCTCTACTTGAGTTATGTGCACAGCTACTTCAGCAAGGAAACCTTGAAGAGCTTGCTGCTGTGCTAAGACCATTTGGAGAAGATGCTGTATCTGTGTCTTCCAGAGAAACAGCGATATTGCTAACAAAAAGCCTCATGGCCACACAAAAACTTAATCCTGAAACGTAG 2889 0.4067 MESGGKMEDYEVIQQIGRGALGATFLVLHKTEKKRYVLKKIRLSKQADKSKVTAQQEMDLIAKLNYPYIVEYKDAWVEKEDCICIITGYCEGGDMAANIKKARGSYFSEEKVCKWLTQLLLAVDYLHSNRVLHRDLKCSNIFLTKENNIRLGEFGLAKLLNPEDLTSPAFGTLNYMCPEAFAGMPYGYKSDMWSLGCCMFEIVAHQLAFRAPDRAGLINKINRCSISPLPIVYSSTLKQLIKSMLRKNPEHRPTASELLRHPHLQPYVLRCRNASSIYLPVHLINSNSPKDKTKNKSSGSKDHWDKEAELAGLVNRLDRIYPFQGNADVQTRNQHNEGKVAVPTKDNVETKMVDSTSYTQEFSTSISGSKDGSTTSESTVCSVSKEGDFKNRFARDTADSEITSKSTIDCVHEEQGLTTQKSCAIDINTVIKNVEDILSKEDLNTDEALSEDAKPRDYSKSTLSSEGSESNDKVESIDEIMSKSTLDSVHEEHRFTVDHFQKLDVIDLSTVSTEVEDNFSSEGFDKKETDMENDKPEDSRKSIVFIENIEGNDNHVSIDEITSKGILESVHDEQEFTAEHFPESDVIDTNSVATKFEDNFRTEAFDQTETETKNGEQEESRISVVSNENMDGDDNDRFIDEIGLKSTLDSVHEEQWLVAEPAQKLDLVDIKATASKDVDKVSNEGSGGAEAQREDAKLECSSKLIISHDNSNGNDEDGSGGEITSKSVLESVGEEQGLTAEHFQTSDAIDLNAVTTEFEDKLSSEGFDKAETQEKDAKPEDSFKSLSSEGSSSSDKEGSIDEEIASSPMAQPVKVEHDTETGSSLKEDENPEAFEEGSLMNSLTSDTKDTYPVKDENREDTHTISCSTCNEDNNAVVTQKQANGISSMKRISRGSNASCQQRADALESLLELCAQLLQQGNLEELAAVLRPFGEDAVSVSSRETAILLTKSLMATQKLNPET 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00387 962 MobiDBLite consensus disorder prediction 446 475 - -
Viun7g00387 962 CDD STKc_Nek 9 264 - -
Viun7g00387 962 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 7 911 - -
Viun7g00387 962 MobiDBLite consensus disorder prediction 676 852 - -
Viun7g00387 962 Gene3D Phosphorylase Kinase; domain 1 2 89 - -
Viun7g00387 962 ProSiteProfiles Protein kinase domain profile. 10 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g00387 962 SUPERFAMILY Protein kinase-like (PK-like) 7 285 IPR011009 -
Viun7g00387 962 SMART serkin_6 10 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g00387 962 ProSitePatterns Serine/Threonine protein kinases active-site signature. 131 143 IPR008271 GO:0004672|GO:0006468
Viun7g00387 962 MobiDBLite consensus disorder prediction 704 752 - -
Viun7g00387 962 Gene3D Transferase(Phosphotransferase) domain 1 92 351 - -
Viun7g00387 962 Pfam Protein kinase domain 10 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g00387 962 MobiDBLite consensus disorder prediction 819 833 - -
Viun7g00387 962 MobiDBLite consensus disorder prediction 761 783 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00387 Viun-Chr7 2735173 2743083 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00387 14 293 MAP Kinase Kinase Kinase AT1G09000 28.383 1.26e-29 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Viun7g00387 Pkinase 2.6e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00387 K08857 - gmx:100818558 1150.96