Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00385 ATGGGGAAGAAGAAGAGAAGTAGGGTTTCTGATGATGATGAGGGATTCGAAACCCACTCTTCTGATCACAACGAGAACACCCTCTATCAGGTTCTTGGTGTGGAGCCAACAGCATCTCAACAGGAAATAAAGAAGGCATACCACAAGTTGGCATTGAGGCTGCATCCTGATAAGAACCCTGGTGATGAGGAAGCTAAAGCTAAGTTTCAACAATTACAACATGTTTTCTCAATTCTTGGGGATGAAGAAAAGCGGGCTGTTTATGATCAGACTGGTTGTGTTGATGATGCCGAGCTTGCAGGGGAAGTTGTTCAGAATCTCAAAGAATATTTCAAAGCAATGTACAAGAAGGTCACTGAAGCTGATATTGAGGAGTTTGAAGCAAACTATAGGGGATCTGATTCCGAGAAAAATGATTTGATTAACCTCTACAAGAAGTACAAGGGTAAAATGGATAGGTTATTCTGTTCAATGCTTTGTTCAGATCCTAAACTTGATTCGCACCGATTCAAGGATATTCTTGATGAGACTATAGCTGCTGGAGAACTAAAGGAAACAAAAGCCTACAAGAAATGGGCAAAAAAAATATCAGAAACCAAACCACCTACCAGTCCCGTAAGAAGGCAGGCAAAATCATCAAAGGAACAATCAGAAACAGATCTGTGTGCCATCATATCACAGCGTCAACATGAGAGGAAAAACCGCCTTAATTCTATGTTCTCATCTCTAATTTCAAAGTATGGTGGGGATCAAATGCCAGAACCCTCTGAAGAGGAATTTGAAGCTACACAGAGAAAACTGGAAAAGCGTAGGTCCTCAAAAAAGTCAAAGCAAAGATAA 840 0.4071 MGKKKRSRVSDDDEGFETHSSDHNENTLYQVLGVEPTASQQEIKKAYHKLALRLHPDKNPGDEEAKAKFQQLQHVFSILGDEEKRAVYDQTGCVDDAELAGEVVQNLKEYFKAMYKKVTEADIEEFEANYRGSDSEKNDLINLYKKYKGKMDRLFCSMLCSDPKLDSHRFKDILDETIAAGELKETKAYKKWAKKISETKPPTSPVRRQAKSSKEQSETDLCAIISQRQHERKNRLNSMFSSLISKYGGDQMPEPSEEEFEATQRKLEKRRSSKKSKQR 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00385 279 PRINTS DnaJ domain signature 64 84 IPR001623 -
Viun7g00385 279 PRINTS DnaJ domain signature 29 47 IPR001623 -
Viun7g00385 279 PRINTS DnaJ domain signature 84 103 IPR001623 -
Viun7g00385 279 PRINTS DnaJ domain signature 47 62 IPR001623 -
Viun7g00385 279 MobiDBLite consensus disorder prediction 244 279 - -
Viun7g00385 279 SMART dnaj_3 26 84 IPR001623 -
Viun7g00385 279 MobiDBLite consensus disorder prediction 202 219 - -
Viun7g00385 279 Pfam DnaJ domain 28 89 IPR001623 -
Viun7g00385 279 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 17 278 IPR042977 -
Viun7g00385 279 MobiDBLite consensus disorder prediction 196 219 - -
Viun7g00385 279 MobiDBLite consensus disorder prediction 1 21 - -
Viun7g00385 279 MobiDBLite consensus disorder prediction 1 26 - -
Viun7g00385 279 ProSitePatterns Nt-dnaJ domain signature. 69 88 IPR018253 -
Viun7g00385 279 SUPERFAMILY Chaperone J-domain 26 99 IPR036869 -
Viun7g00385 279 ProSiteProfiles dnaJ domain profile. 27 92 IPR001623 -
Viun7g00385 279 Gene3D DnaJ domain 12 121 IPR036869 -
Viun7g00385 279 CDD DnaJ 27 81 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00385 Viun-Chr7 2717397 2720395 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00385 29 89 C2H2 Transcription Factor Family AT1G74250 42.424 3.30e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00385 K09529 - gmx:100781463 444.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g00385 7 2717397 2720395 Viun7g00385 7 2717397 2720395 ECH
Viun1g01783 1 29581676 29584140 Viun7g00385 7 2717397 2720395 PCT