Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00360 ATGGGGTTCTCCATAGCTATCGAATTAGAAGCAGCACAGCAACAACAAGAGCAAGAGACAAAGTTTTTAAGCTCCTCTCTGAATATCATGGCTTCTTCAACTGTTAAGACCACCAACTCAACAACTCAACTTGAACCACTCCCTCCACATCTTCATCATCAACAACCACCACATCATTTTCATCATCATCATCATCATCATCAAATACCAGACCAACAAATCTCCTTTGGGATGATGCCATCTTCCTCATCACACTCTATCCCTGCAAATTACTTAAGCAAAGATTCTGGAGCTTATGATCTGGGAGAATTGGATCAAGCCTTTTTTTTATATCTTGATGGTCAAGCTGACCCTTCTAGTGTTCAAGACCAAAGACAGAACTCATCATCAGGAATGAGGCCACCACCAACTCTCAATATTTTCCCATCTCAGCCTATGCACGCAGTGCCACCACCCAATTCCAAGGTTAGCATGGAGTTACCCTCCACGCAAACCAGTGGCTCCAAGAGACCAGGGTCATCCATAACCAAGCCCAACCCTCACACTGAAGCTCCCTCAGCACCTGAACCACCGAAAGCTGTAAAGCGAGAGGGAAATCGCAAGGGAGCAACCTCAAGTTCTGAGCAGGAAGCACCCAAAACACCAGATCCTAAGACACTGAGAAGACTTGCTCAGAATAGAGAAGCAGCAAGAAAAAGCAGGCTCAGAAAAAAGGCGTACGTTCAGCAGCTAGAGTCAAGTAGAATTAAGCTTAATCAGCTAGAACAAGAGTTGCAGCGTGCAAGAGCTCAAGGCATATTAATGGGTGGAAATGCCCTTCTGGGAGGTGACCAAGGCTTTCCTATGGCTATGACTGGCATTAGCTCAGAGGCTGCAATGTTTGACGTGGAATATACGAGATGGTTAGAGGAGCACCAGCGTATAGTGTGCGAGCTAAGAGGTGCAGTGCAAGAACACCTCCATGAAAACGAGCTTCGATTATACGTGGACAATTGTTTGGCTCACTACGACCAAGTAATGAATCTCAAGAGCATAGTGGCCAAAACAGACGTATTCCACCTTGTTTTCGGCATGTGGAAGACCCCAGCCGAACGTTGCTTCATGTGGATCGGTGGTTTCAGACCCTCCGAACTCATCAAGATTATTCTGGGTCAAATTGAGCCTCTCACAGAGCAACAGATACTTGGGATATGTGGGTTGCAACAATCCACACAAGAGGCAGAAGAGGCTCTTTCACAAGGGCTTGATGCCCTAAACCAATCTCTCTCGGACACTTTAACTTCAGACTCTCTCTGGTGTCCTCCAAATATGACTAACTACATGGGACAGATGGCTGTGGCAATGAACAAACTCTCCACCCTTGAAAGTTTTGCGAGACAGGCTGATAATCTGAGGCACCAAACCATTCACCGTCTGCAGCAACTGCTAACCACGCGCCAAGCCGCAAGGTGTTTGGTGGCCATTTCTGAGTACTTCCATCGTCTTCGAGCTCTGAGTTCTCTCTGGTTCACGCGCCCTCGCCAAGACTAG 1530 0.4699 MGFSIAIELEAAQQQQEQETKFLSSSLNIMASSTVKTTNSTTQLEPLPPHLHHQQPPHHFHHHHHHHQIPDQQISFGMMPSSSSHSIPANYLSKDSGAYDLGELDQAFFLYLDGQADPSSVQDQRQNSSSGMRPPPTLNIFPSQPMHAVPPPNSKVSMELPSTQTSGSKRPGSSITKPNPHTEAPSAPEPPKAVKREGNRKGATSSSEQEAPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLNQLEQELQRARAQGILMGGNALLGGDQGFPMAMTGISSEAAMFDVEYTRWLEEHQRIVCELRGAVQEHLHENELRLYVDNCLAHYDQVMNLKSIVAKTDVFHLVFGMWKTPAERCFMWIGGFRPSELIKIILGQIEPLTEQQILGICGLQQSTQEAEEALSQGLDALNQSLSDTLTSDSLWCPPNMTNYMGQMAVAMNKLSTLESFARQADNLRHQTIHRLQQLLTTRQAARCLVAISEYFHRLRALSSLWFTRPRQD 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00360 509 Coils Coil 237 264 - -
Viun7g00360 509 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 216 260 IPR004827 GO:0003700|GO:0006355
Viun7g00360 509 MobiDBLite consensus disorder prediction 156 181 - -
Viun7g00360 509 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 221 236 IPR004827 GO:0003700|GO:0006355
Viun7g00360 509 Gene3D - 217 267 - -
Viun7g00360 509 MobiDBLite consensus disorder prediction 35 87 - -
Viun7g00360 509 MobiDBLite consensus disorder prediction 117 221 - -
Viun7g00360 509 MobiDBLite consensus disorder prediction 54 68 - -
Viun7g00360 509 FunFam BZIP family transcription factor 217 266 - -
Viun7g00360 509 SUPERFAMILY Leucine zipper domain 218 260 IPR046347 GO:0003700|GO:0006355
Viun7g00360 509 CDD bZIP_HBP1b-like 218 270 - -
Viun7g00360 509 ProSiteProfiles DOG1 domain profile. 291 505 IPR025422 GO:0006351|GO:0043565
Viun7g00360 509 Pfam bZIP transcription factor 218 256 IPR004827 GO:0003700|GO:0006355
Viun7g00360 509 MobiDBLite consensus disorder prediction 117 137 - -
Viun7g00360 509 PANTHER TRANSCRIPTION FACTOR TGA9 130 508 - -
Viun7g00360 509 Pfam Seed dormancy control 309 382 IPR025422 GO:0006351|GO:0043565
Viun7g00360 509 SMART brlzneu 214 300 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00360 Viun-Chr7 2548239 2554917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00360 89 509 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 63.657 0.0 549
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun7g00360 DOG1 2.6e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00360 K14431 - gmx:100800059 839.336