Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00356 TTTCTTACCATCAGGGACCTTTCGTACAATAATTTCACCGGTGATCTGCCAAGTTCATTTGGGTCCTTGACAACCCTGGAAAGATTATTCCTGCAGAACAACAGATTCACCGGATCAGTCACCTACCTGGCTGAGCTTCCACTCATTGATTTGAACATTCAAGACAATCTGTTTAGCGGCCTTCTTCCCCAGCATTTTCAGTCCATACCAAACTTATGGATTGGAGGGAATAAGTTCCAAACCGTGGACGGCTCTCCTCCCTGGGCATTTCCCTTGGACAACGTACCCCTTGAGAAAAACACTAGTCGCCCACCCATAACTCAGGCAAATGCCATCGAGAACTACGCTCCTATTAGAGTAAGGAAACAAAAGAAGAAACATATCGGTCCTGGAGGAATAGCTTTTATGGTCGGTACAGGAACATTATTGGCAACAGGTTTGGCTCTCCTCATTGCGATCCGTTTGAATAAGCTTTATACAAAGAGACTGGAGAACTACGAAAGCGACCATAGTGCATTGCCTTCTTGTCCAATCAGTGCGAGCAAAGAAGATTCTACTACGGCAATAGTCGAGAGCCAACAAATCCCACCTTATAATGCTGCATCCCTTTTGGGTCCAAGGCGGCTAACTTCCCAAACTCATAAAAGAACTGGGGAAACATCAAGAAAAAGCTTTTCCGGAAGAGACAGATTCAATGGAAGGATAAAGGTTTATACAGTAGCGGAGGTTCAGTTGGTTACAAACAGTTTCCATGAAGACAACCTTCTGGGAGAAGGATCCCTTGGTCCTGTTTATAGAGCTGAATTTTCTGATAACAAGGTTTTAGCCGTGAAGAATATCAACATGGCGGGCATGTCTTTCAGTGAAGAGGAAAAGTTCTTAGATGTCGTGAGCACGGCTTCCCGTTTGAAGCACCCTAACATTGTTTCACTTAAAGGCTACTGTTTGGAGCATGGACAACATCTTCTTGTCTTTGAGTATGTGAGAAATTTAACTCTAGATGATGCTCTTCATAGTACAGCATACAAACCTTTATCGTGGGGCACACGTCTCCGGATCGCTCTAGGTGTTGGTCAGGCCCTGAACTATTTGCACTCGACGTTCTCCCCTCCTGTCGCCCATGGCAAATTAAAGGCTACCAATGTTCTACTGGACGAAAACCTTATGCCTCGTGTTACTGACTGTGGCTTGGCTATTCTGAGACCACTGACAAGCAATAAAGCCAAAAACCGGGCTTCCGAGATTGATATTAGAGATACAGGATACAGTTCACCTGACCATGGCCAACCAGGAATTGGCAGCACGAAGAGCGACATCTTTGCCTTTGGCGTGTTGCTTCTTGAACTATTAACAGGAAGAAAACCTTTCGATGGTTCCAGGCCAAGGGAAGAGCACTATCTGGCGAAGTGGGCTTCATCAAGGCTTCATGATAGTGACAGTTTGGAACAAATGGTAGATCCAGCAATCAAACGGACATTTTCATCCAAGGCTCTTTCTCGTTATGCTGATATCATCTCCCTCTGCATTCAGCCCGTGAAGCAATTTCGACCTCCAATGTCTGAAATCGTGGACAATCTTGTATCATTTTCTCAAAAGCTTGTTTCAGAGAGTGGTGAAGCAGATGAAACTGAACTTGATCCACTTAACATGTCTTTTCACACAACTATCTCCCGCTTCAACGGTTCACCTGCTCTCAGCTACGTATCCGCCTGA 1713 0.4501 FLTIRDLSYNNFTGDLPSSFGSLTTLERLFLQNNRFTGSVTYLAELPLIDLNIQDNLFSGLLPQHFQSIPNLWIGGNKFQTVDGSPPWAFPLDNVPLEKNTSRPPITQANAIENYAPIRVRKQKKKHIGPGGIAFMVGTGTLLATGLALLIAIRLNKLYTKRLENYESDHSALPSCPISASKEDSTTAIVESQQIPPYNAASLLGPRRLTSQTHKRTGETSRKSFSGRDRFNGRIKVYTVAEVQLVTNSFHEDNLLGEGSLGPVYRAEFSDNKVLAVKNINMAGMSFSEEEKFLDVVSTASRLKHPNIVSLKGYCLEHGQHLLVFEYVRNLTLDDALHSTAYKPLSWGTRLRIALGVGQALNYLHSTFSPPVAHGKLKATNVLLDENLMPRVTDCGLAILRPLTSNKAKNRASEIDIRDTGYSSPDHGQPGIGSTKSDIFAFGVLLLELLTGRKPFDGSRPREEHYLAKWASSRLHDSDSLEQMVDPAIKRTFSSKALSRYADIISLCIQPVKQFRPPMSEIVDNLVSFSQKLVSESGEADETELDPLNMSFHTTISRFNGSPALSYVSA 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00356 570 FunFam Leucine-rich repeat receptor-like protein kinase 328 537 - -
Viun7g00356 570 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 215 327 - -
Viun7g00356 570 Gene3D Ribonuclease Inhibitor 1 126 IPR032675 -
Viun7g00356 570 Gene3D Phosphorylase Kinase; domain 1 209 327 - -
Viun7g00356 570 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 5 73 - -
Viun7g00356 570 ProSiteProfiles Protein kinase domain profile. 250 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g00356 570 SUPERFAMILY L domain-like 6 82 - -
Viun7g00356 570 Pfam Protein tyrosine and serine/threonine kinase 253 526 IPR001245 GO:0004672|GO:0006468
Viun7g00356 570 SUPERFAMILY Protein kinase-like (PK-like) 227 526 IPR011009 -
Viun7g00356 570 Gene3D Transferase(Phosphotransferase) domain 1 329 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00356 Viun-Chr7 2506178 2509981 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00356 6 570 Strubbelig Receptor Gene Family AT5G06820 53.263 0.0 555
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Viun7g00356 PK_Tyr_Ser-Thr 3.5e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00356 - - vun:114191517 1121.3