Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00352 ATGTATCATTCTTCGCAGGAGTTCACCGGAGTTCATAACAGTGTGGCCAACGTTGGAGGCTCAGAAAACAACACCTTCAACTTCCAACATCATGACCAACATCTGTTTGATGTTCCCGTTTCATGTTTGAACTTCGATTCGCAAAATTTTCTGTGTCAGTCTTCTGGGGACAACTCGGCTCAACTGTTCGGAAGTGTTGTTGATTCCTTCTTATCCACCCATGAAGACACGTTCTACGAAACGTATAGTGTTTACGAGCATTTCAGAAACGAGAAAAATAACGTATCGGAGGGTGGTGCTTCTGCCCCAGTTGATGGGGTTGAGGTTGTTTGTGCCACTTCTGGAAACACAGCTTCTAGCATGGTTCCAACGAGGAAAAAAAAAGGAATAAAATGGACCAAAGATTTGCACGAACAGTTCGTAGCAGCTGTTAACAGCCTTGGTGGTGCTCAAAAAGCAACGCCCAAGGCAGTGCTAAGGATGATGAATTCAAAGTCCCTGACAATTTTTCATGTTAAAAGCCACTTGCAGAAATATCGATCCACTATGTTCGTGAAGAACACTTTCAGAGAAGGGCACGAAGAAAGTGATGGCAGAGACATGGTCACTGAACTTCAACAGAAAATATGTATGCAAATTGAGGAATCACGAAAACTGCAACTTGAGATTGGGAGGGGTATTCAAGAACAATTAGAGCTTCAACGAAATTTGCAAATGCTGGTCCAAGAACAAAAGAAACAGGTCAACGATGCAAAGAAAGGAAATTGA 768 0.4258 MYHSSQEFTGVHNSVANVGGSENNTFNFQHHDQHLFDVPVSCLNFDSQNFLCQSSGDNSAQLFGSVVDSFLSTHEDTFYETYSVYEHFRNEKNNVSEGGASAPVDGVEVVCATSGNTASSMVPTRKKKGIKWTKDLHEQFVAAVNSLGGAQKATPKAVLRMMNSKSLTIFHVKSHLQKYRSTMFVKNTFREGHEESDGRDMVTELQQKICMQIEESRKLQLEIGRGIQEQLELQRNLQMLVQEQKKQVNDAKKGN 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00352 255 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 107 248 IPR044848 GO:0003700
Viun7g00352 255 NCBIfam myb-like DNA-binding domain, SHAQKYF class 127 181 IPR006447 GO:0003677
Viun7g00352 255 Gene3D - 126 184 - -
Viun7g00352 255 Coils Coil 251 255 - -
Viun7g00352 255 FunFam Two-component response regulator 123 185 - -
Viun7g00352 255 Pfam Myb-like DNA-binding domain 131 180 IPR001005 -
Viun7g00352 255 SUPERFAMILY Homeodomain-like 124 181 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00352 Viun-Chr7 2452744 2454564 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00352 127 246 G2-like Transcription Factor Family AT4G28610 46.721 3.49e-31 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Viun7g00352 Myb_DNA-binding 1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00352 - - gmx:100776650 350.517