Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00351 ATGAACGACTACAAGATTGACTGTGTTGGACGGATTCAACGAAGCTATGGTCTGAATGGGGATTTGAGTTCAGAGTTTGGCAATTGTTCTAGTCAATGTTTTGATATAATACAGGCATCAAATATGGGAACTTGCAATCAGCCACTTGCTATGGCCAGTGGTGGATTTGAACAGGAACCACACATAGGCCAAACCAAATCCTCTAGCAGCATTATAAGCCGTTTTGAATCACCAGCTTCAGCTTTTTATGCAACAGAAATCTGCATGGGTTTCCCACAATATGGTAACCCCTCTTTGATTTCTCAATTCTCTATGATCAGTGATGTGGAATTCCCTTTGTATCAATCTCCAAGGCAGAACCTTTTCTTGGCTTCATTGGCAAACCAACCTGCTCCTAACTTTGAGTTGTCAAATCCCTTGCAAGCAATGCTCTTATCCCATGTCAATAGTGATCAATGTGTTAGATCTTCTGAAAAATCTGATAAAGCCCCATCTGGGAATTTCCCTTGCAGCAGTTTTCTTCCAATTATTGATGATGCTGCTGCTGCAAGCCCTTCAGTTCCTTGCAAAGGAAATCAGGATCAAAGAGATTGTTCTGCACAGATTAGCTTCTCTTCTCAGCAAGAGATGCAGTCACCAACACTCTCAGCAGGTAGTTTGTTAACTTCTTCTGGAAACTCTGCTTCAAATGGAGCAGTAGTCTCAAGTAAAACAAGAATAAGATGGACTCAGGAACTTCACGAGAAGTTTGTTGAGTGTGTGAATCGCCTTGGAGGTGCTGAGAAAGCAACGCCAAAAGCTATATTAAGGCTGATGGAATCAGATGGATTGACCATCTTCCATGTTAAGAGTCATCTGCAGAAATATAGAATTGCCAAATACATGCCACAATCAACTCAAGGGAAATCTGAGAAAAGAACCAATGTAGAGAATGTGCATCTTGATGCCAAAACTGGCTTGCAAATTAGAGAGGCACTTCAGCTGCAGCTAGATGTTCAGAGGCGCCTTCATGAACAACTAGAGATTCAGAGAAAATTACAGTTGAGGATTGAGGAGCAAGGTAAGCAGCTGAAAATGATGTTTGATCAACAGCAGAAGACAAGTGACAGCAACTTGAGTACTCAGAATTTGGACAATACAACTAATAATGATAGAAGTATTAGTTCTAAAGATGTTCAGGTTTCAATTTCTGAAGGCTCTGAAAGATTACTTGTTCCTTCCAACATAACTTAG 1233 0.4071 MNDYKIDCVGRIQRSYGLNGDLSSEFGNCSSQCFDIIQASNMGTCNQPLAMASGGFEQEPHIGQTKSSSSIISRFESPASAFYATEICMGFPQYGNPSLISQFSMISDVEFPLYQSPRQNLFLASLANQPAPNFELSNPLQAMLLSHVNSDQCVRSSEKSDKAPSGNFPCSSFLPIIDDAAAASPSVPCKGNQDQRDCSAQISFSSQQEMQSPTLSAGSLLTSSGNSASNGAVVSSKTRIRWTQELHEKFVECVNRLGGAEKATPKAILRLMESDGLTIFHVKSHLQKYRIAKYMPQSTQGKSEKRTNVENVHLDAKTGLQIREALQLQLDVQRRLHEQLEIQRKLQLRIEEQGKQLKMMFDQQQKTSDSNLSTQNLDNTTNNDRSISSKDVQVSISEGSERLLVPSNIT 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00351 410 Pfam Myb-like DNA-binding domain 241 290 IPR001005 -
Viun7g00351 410 MobiDBLite consensus disorder prediction 204 234 - -
Viun7g00351 410 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 217 389 IPR044848 GO:0003700
Viun7g00351 410 Gene3D - 236 295 - -
Viun7g00351 410 MobiDBLite consensus disorder prediction 361 394 - -
Viun7g00351 410 SUPERFAMILY Homeodomain-like 235 291 IPR009057 -
Viun7g00351 410 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 236 294 IPR017930 -
Viun7g00351 410 FunFam Myb family transcription factor 236 294 - -
Viun7g00351 410 NCBIfam myb-like DNA-binding domain, SHAQKYF class 237 292 IPR006447 GO:0003677
Viun7g00351 410 Coils Coil 323 343 - -
Viun7g00351 410 Pfam MYB-CC type transfactor, LHEQLE motif 320 367 IPR025756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00351 Viun-Chr7 2444800 2447831 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00351 222 393 G2-like Transcription Factor Family AT4G28610 50.820 2.09e-51 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Viun7g00351 Myb_DNA-binding 4.3e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00351 - - gmx:102668541 576.244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g00351 7 2444800 2447831 Viun7g00351 7 2444800 2447831 ECH