Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00350 ATGAACGACTACAAGATTGACTGTGTTGGACGGATTCAACGAAGCTATGGTCTGAATGGGGATTTGAGTTCAGAGTTTGGCAATTGTTCTAGTCAATGTTTTGATATAATACAGGCATCAAATATGGGAACTTGCAATCAGCCACTTGCTATGGCCAGTGGTGGATTTGAACAGGAACCACACATAGGCCAAACCAAATCCTCTAGCAGCATTATAAGCCGTTTTGAATCACCAGCTTCAGCTTTTTATGCAACAGAAATCTGCATGGGTTTCCCACAATATGGTAACCCCTCTTTGATTTCTCAATTCTCTATGATCAGTGATGTGGAATTCCCTTTGTATCAATCTCCAAGGCAGAACCTTTTCTTGGCTTCATTGGCAAACCAACCTGCTCCTAACTTTGAGTTGTCAAATCCCTTGCAAGCAATGCTCTTATCCCATGTCAATAGTGATCAATGTGTTAGATCTTCTGAAAAATCTGATAAAGCCCCATCTGGGAATTTCCCTTGCAGCAGTTTTCTTCCAATTATTGATGATGCTGCTGCTGCAAGCCCTTCAGTTCCTTGCAAAGGAAATCAGGATCAAAGAATTAGCTTCTCTTCTCAGCAAGAGATGCAGTCACCAACACTCTCAGCAGGTAGTTTGTTAACTTCTTCTGGAAACTCTGCTTCAAATGGAGCAGTAGTCTCAAGTAAAACAAGAATAAGATGGACTCAGGAACTTCACGAGAAGTTTGTTGAGTGTGTGAATCGCCTTGGAGGTGCTGAGAAAGCAACGCCAAAAGCTATATTAAGGCTGATGGAATCAGATGGATTGACCATCTTCCATGTTAAGAGTCATCTGCAGAAATATAGAATTGCCAAATACATGCCACAATCAACTCAAGGGAAATCTGAGAAAAGAACCAATGTAGAGAATGTGCATCTTGATGCCAAAACTGGCTTGCAAATTAGAGAGGCACTTCAGCTGCAGCTAGATGTTCAGAGGCGCCTTCATGAACAACTAGAGATTCAGAGAAAATTACAGTTGAGGATTGAGGAGCAAGGTAAGCAGCTGAAAATGATGTTTGATCAACAGCAGAAGACAAGTGACAGCAACTTGAGTACTCAGAATTTGGACAATACAACTAATAATGATAGAAGTATTAGTTCTAAAGATGTTCAGGTTTCAATTTCTGAAGGCTCTGAAAGATTACTTGTTCCTTCCAACATAACTTAG 1218 0.4064 MNDYKIDCVGRIQRSYGLNGDLSSEFGNCSSQCFDIIQASNMGTCNQPLAMASGGFEQEPHIGQTKSSSSIISRFESPASAFYATEICMGFPQYGNPSLISQFSMISDVEFPLYQSPRQNLFLASLANQPAPNFELSNPLQAMLLSHVNSDQCVRSSEKSDKAPSGNFPCSSFLPIIDDAAAASPSVPCKGNQDQRISFSSQQEMQSPTLSAGSLLTSSGNSASNGAVVSSKTRIRWTQELHEKFVECVNRLGGAEKATPKAILRLMESDGLTIFHVKSHLQKYRIAKYMPQSTQGKSEKRTNVENVHLDAKTGLQIREALQLQLDVQRRLHEQLEIQRKLQLRIEEQGKQLKMMFDQQQKTSDSNLSTQNLDNTTNNDRSISSKDVQVSISEGSERLLVPSNIT 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00350 405 MobiDBLite consensus disorder prediction 185 229 - -
Viun7g00350 405 MobiDBLite consensus disorder prediction 356 389 - -
Viun7g00350 405 MobiDBLite consensus disorder prediction 188 229 - -
Viun7g00350 405 FunFam Myb family transcription factor 231 289 - -
Viun7g00350 405 Coils Coil 318 338 - -
Viun7g00350 405 NCBIfam myb-like DNA-binding domain, SHAQKYF class 232 287 IPR006447 GO:0003677
Viun7g00350 405 Pfam Myb-like DNA-binding domain 236 285 IPR001005 -
Viun7g00350 405 Pfam MYB-CC type transfactor, LHEQLE motif 315 362 IPR025756 -
Viun7g00350 405 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 231 289 IPR017930 -
Viun7g00350 405 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 202 384 IPR044848 GO:0003700
Viun7g00350 405 SUPERFAMILY Homeodomain-like 230 286 IPR009057 -
Viun7g00350 405 Gene3D - 231 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00350 Viun-Chr7 2444796 2447839 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00350 217 388 G2-like Transcription Factor Family AT4G28610 50.820 3.15e-51 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Viun7g00350 Myb_DNA-binding 4.3e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00350 - - gmx:102668541 570.852