Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00328 ATGGATGGGTTGGGGGACATAAGTTATTGTGGAGGTTGCAACATCAGGTTAGGAAATATGTACTCGGCTTTTCCAGCTGGTGACTGGGCATGTATGGAAGGGAACAACTTTTGGTGGCTTCAAGAGTCAATCACAAGTTCCTTGGCTTGTAGAAAAGTACATGAAGAAGATGGAAAAAAGTTCTTAATCCTGAACTTGTTAAAGGACATTGGACAAAGGAGATGGTGCAATCATCTTAGTCCAGACATAAAGAAGGATCCCTGGATTTTGGAGGAGGAATTAGCTCTTATTAAAGCTCATTGTATACATGGCAACAAATGGGCTGAAATAGCCAAGGTTCTATGTGGAAGCAAACCGGTGATGCAAATGAGCCTGAGTCTTCTATGGGTACAAGAGGATCATCTGGTGGTAGCAACATTTAGGGTGTTGATGATGTTTTTTAGGATGAAACTATTTTAG 459 0.4118 MDGLGDISYCGGCNIRLGNMYSAFPAGDWACMEGNNFWWLQESITSSLACRKVHEEDGKKFLILNLLKDIGQRRWCNHLSPDIKKDPWILEEELALIKAHCIHGNKWAEIAKVLCGSKPVMQMSLSLLWVQEDHLVVATFRVLMMFFRMKLF 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00328 152 CDD SANT 87 116 IPR001005 -
Viun7g00328 152 SUPERFAMILY Homeodomain-like 73 116 IPR009057 -
Viun7g00328 152 Pfam Myb-like DNA-binding domain 85 115 IPR001005 -
Viun7g00328 152 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 80 114 IPR017930 -
Viun7g00328 152 PANTHER MYB PROTEIN-RELATED 72 116 - -
Viun7g00328 152 ProSiteProfiles Myb-like domain profile. 80 118 IPR001005 -
Viun7g00328 152 Gene3D - 87 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00328 Viun-Chr7 2355252 2360556 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00328 72 116 MYB Transcription Factor Family AT3G09370 68.889 3.57e-16 72.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Viun7g00328 Myb_DNA-binding 5.8e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00328 K09422 - vun:114191657 326.635