Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00312 ATGTGTCAGAACTCAGAATTGGCCTTCAATTTTTTTCGTGACCCTTCTTCCACCTTGTCTAAAAATCATTGCAAACCCTTCAAAAATCCATTTCAAAACAGAAATATGAACCCCCCTTGGTTAGTCAAATATCAATATGCAGCAACACTCTTCTTCGTTACCATGGCCCTTACCAAAGTTACCTGTTTTCAGTTCAACTTCCCTACCTTCGAACCAGAGGATGAGTCTAATCTATGGCTGCACGAGAATTCAAAAATATACTTAAATGCTATCCAAGTAACCCCTGATATTCGTGGTCCCATACATGATTATTCTGGACGTGCTTTCTATGGAAAGCCGTACCAACTTTGGAAACAGAAGAAGAACCATAACCAAATGGCTTCCTTCAACACCACTTTTGTGCTCAACATCACTCCACAAACTACCCCAGGTGGTGAAGGCTTGGCCTTTATCTTAACTTCAGATAGAACTCTCCCACAAAATAGTCAAGGAGAATGGCTTGGTATTGTAAATGCTACTTCCAATGGAACTTCACAAGCTGCTATCCTAGCGGTGGAGTTTGACACAAGACACAGTTTCACAGAAGATGGTCCTGACAATCATGTTGGCATCAACATAAACAGCATCAACTCCATCCATCAGGTTTCGTTAATAAACACTCGCCTTAATCTTTCGTCAGGTCAAGATGTCAAATTTCACATTCAATTCATCAATGACATAATATCAGTTTTTGGTGCCATGAATGGAACTTCCGGAGAATCTATGGAGACCCTCTTGGTAACTCCACCTCTTAATTTATCTTCCTTTCTTCAACAAGAGGTTTACCTCGGTTTCTCCGGCTCAACAAGTAACTACACGCAGCTGAACTGTGTGAAATCGTGGGAATTCAGTGGGGATGATATTAGAGATGATGACAAAAGCCTCTTGTGGGTTTATGTTGCCGTTCCAATCGTGATTGTTTTAATTATCGTTGGTGGGCTGGTGATCTTTTTCTTGCGCTGGAAAAAGATTCGCCATATGGAGGGTCCAGAAGATGCATATCCAAGGATAGAGGATCAGATTCAATATTCCTCTATGGCTCCAAAGAAGTTTAGGCTAACTGAACTAACGAAAGCAACTGGTGGATTCAGCCTTCAAAACAAGCTTGGACAAGGTGGGTTTGGAACTGTGTATAAGGGGCTATTGGAAAACAAGGAAGTAGCTGTAAAGAGGGTCTCCAAGAACTCACGCCAAGGGAAGCAAGAGTTTGTGGCAGAAGTGACAACAATAGGAAGCCTTCACCATAAAAATTTGGTGAAACTCACTGGTTGGTGCTACGAGAATAGAGAGCTTCTCCTTGTGTACGAGTTCATGCCTAAAGGAAGCCTAGACAAGTACCTCTTTGGTGACAAAGATTCTGGGAATAATTATAACCTAGAAGGAGGGTATTCCATAACACTGAATTGGGAAACTAGGCTGGGAGTGATTCATGGGGTGGCTCAAGCACTTGACTACCTTCACGATGGGTGTGAGAAGAGGGTTCTCCACAGAGACATCAAGGCCAGCAACATAATGCTGGACTCAGATTACAATGCCAAGCTGGGAGACTTTGGATTGGCCAGAACAATTCAGAAGAGAGATGAGACACATCACTCTACAAAAGAGATTGCAGGCACACCCGGTTACATGGCCCCAGAAACCTTTCTGATTGGGAGGGCAACGGTGGAGACAGATGTGTATGCATTTGGGGTTCTTGTGTTGGAAGTAGTGTGTGGAAAGAGGCCAGGGAATGTGTATGCACAAGATGACTACAAGAACAGCATTGTGTATTGGGTGTGGGATTTGTATGGGAAGGGAAAAGTAGTTGGTGGTGTTGATGCAAGGTTGAAGAAAGAAGAGATTAAGGAGGAAGAGGTGGAGTGTGTTCTTGTTCTTGGTTTGGCTTGCTGCCATCCAAATCCACACAAAAGACCATCCATGAGAACAGTTCTTCAGGTTCTGAATGGGGAAGCATCTCCACCTCAAGTGCCTAAGGAAAGACCAGCTTTTATGTGGCCTGCTATGCCTCCATCTTTCAAAGAAGGTGAAGATAGCTCCCTTATCCAGGGAACACTCACTCCTTTCACTGAGATCACTGGAAGATGA 2124 0.4346 MCQNSELAFNFFRDPSSTLSKNHCKPFKNPFQNRNMNPPWLVKYQYAATLFFVTMALTKVTCFQFNFPTFEPEDESNLWLHENSKIYLNAIQVTPDIRGPIHDYSGRAFYGKPYQLWKQKKNHNQMASFNTTFVLNITPQTTPGGEGLAFILTSDRTLPQNSQGEWLGIVNATSNGTSQAAILAVEFDTRHSFTEDGPDNHVGININSINSIHQVSLINTRLNLSSGQDVKFHIQFINDIISVFGAMNGTSGESMETLLVTPPLNLSSFLQQEVYLGFSGSTSNYTQLNCVKSWEFSGDDIRDDDKSLLWVYVAVPIVIVLIIVGGLVIFFLRWKKIRHMEGPEDAYPRIEDQIQYSSMAPKKFRLTELTKATGGFSLQNKLGQGGFGTVYKGLLENKEVAVKRVSKNSRQGKQEFVAEVTTIGSLHHKNLVKLTGWCYENRELLLVYEFMPKGSLDKYLFGDKDSGNNYNLEGGYSITLNWETRLGVIHGVAQALDYLHDGCEKRVLHRDIKASNIMLDSDYNAKLGDFGLARTIQKRDETHHSTKEIAGTPGYMAPETFLIGRATVETDVYAFGVLVLEVVCGKRPGNVYAQDDYKNSIVYWVWDLYGKGKVVGGVDARLKKEEIKEEEVECVLVLGLACCHPNPHKRPSMRTVLQVLNGEASPPQVPKERPAFMWPAMPPSFKEGEDSSLIQGTLTPFTEITGR 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00312 707 SUPERFAMILY Protein kinase-like (PK-like) 357 660 IPR011009 -
Viun7g00312 707 FunFam Probable L-type lectin-domain containing receptor kinase S.5 361 450 - -
Viun7g00312 707 PANTHER - 92 670 - -
Viun7g00312 707 ProSitePatterns Protein kinases ATP-binding region signature. 382 403 IPR017441 GO:0005524
Viun7g00312 707 Gene3D - 61 308 - -
Viun7g00312 707 FunFam probable L-type lectin-domain containing receptor kinase S.5 451 666 - -
Viun7g00312 707 Pfam Protein tyrosine and serine/threonine kinase 377 659 IPR001245 GO:0004672|GO:0006468
Viun7g00312 707 ProSiteProfiles Protein kinase domain profile. 376 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g00312 707 ProSitePatterns Serine/Threonine protein kinases active-site signature. 507 519 IPR008271 GO:0004672|GO:0006468
Viun7g00312 707 FunFam Probable L-type lectin-domain containing receptor kinase S.5 62 305 - -
Viun7g00312 707 Gene3D Phosphorylase Kinase; domain 1 361 450 - -
Viun7g00312 707 SUPERFAMILY Concanavalin A-like lectins/glucanases 61 303 IPR013320 -
Viun7g00312 707 Gene3D Transferase(Phosphotransferase) domain 1 451 669 - -
Viun7g00312 707 SMART serkin_6 376 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g00312 707 CDD STKc_IRAK 382 662 - -
Viun7g00312 707 Pfam Legume lectin domain 64 305 IPR001220 GO:0030246
Viun7g00312 707 CDD lectin_legume_LecRK_Arcelin_ConA 63 297 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00312 Viun-Chr7 2246737 2249093 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00312 60 676 Receptor kinase-like Gene Family AT5G55830 36.115 9.51e-121 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Viun7g00312 PK_Tyr_Ser-Thr 2.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00312 - - gmx:100785031 1105.89