Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00311 ATGCAGGTCCCTTGGTTAGTCAAATATCAATATGCTGCAACACTCTTCGTTACCATTGCCCTTAGCAAAGTTACCTGTTTTTATTTCAATTTCCCTACCTTCGAACCAGAGAATCAGTCTAATCTATGGCTGCACGACAATTCAAAAATATTCTTAGATGCCATCCAAGTAACCCCTGATATTCGTGGTTCTATGGAGAATTATTCTGGACGTGTTATCTACAGAAAGCCATACCGACTTTGGAAACAGAAGAAGAACCATAACCAAATGGCTTCCTTCAACACCACTTTTGTGCTCAGAATCACTCCCGAAACTACCCCAGGTGGTGAAGGCTTGGCCTTTATCTTAACTTCAGATATGACTCTCCCACTACACAGTGAAGGAGAATGGCTTGGTATTGTAAATGCTACTTCCAACGGAACTTCACAGGCTGCTATTCTAGCGCTGGAGTTTGACACGAGACACAGTTTCACAGAAGATGGTCCTGACAATCACGTTGGCATCAACATAAACAGCATCAACTCCATCCAACAGGTTTCGTTAACAAACAATCGCCTCAATCTTTCGTCGGGTCTAGATGTCAAATTTCACATTCAGTACATCAATGACACGATATCAGTTTCTGGTGCCATGAGTGGAACTTCTGAAGAATCTATGGAGACCCTCTTGGTAACGCCACCTCTTAATTTATCTTCCTTTCTTCAACAAGAGGTTTACCTCGGTTTCTCCGCCTCAACAAGTAACTACACTCAGAGAAACTGTGTAAGATCGTGGGAATTCAGTGGTGATGATATTAGGGATGATGACAAAAGCCTCTTGTGGGTTTATGTTGCCGTTCCAACCGTGGTTGTTTTAATTATCATTGGTGGGTTGGTGATCTTTCTCTTGCGCCGGCAAAAGATTCGCCATATGGAGTGGCCAGAAGATGCATATCCAAGGATAGAGGATCAGATTCAATATTCCTCTATGGCTCCCAAGAAGTTCAGGCTAAGGGAAATAACGAAAGCAACCGGTGGATTCAGCCTTCAAAACAAGCTTGGACAAGGTGGGTTTGGAACTGTGTATAAGGGGCTATTGGAAAACAAGGAAGTAGCTGTAAAGAGGGTCTCCAAGAACTCACGCCAAGGGAAGAAAGAGTTTGTGGCAGAAGTGACAACAATAGGAAGCCTTCACCATAGAAATTTGGTGAAACTCACTGGTTGGTGCTATGAGAATAGAGAGCTTCTCCTTGTGTACGAGTTCATGCCTAAAGGAAGCCTAGACAAGTACCTCTTTGGTGACAAAGATTCTGGGAATAATTATAACCTAGAAGGAGGGTATTCCATAACACTGAATTGGGAAACTAGGCTGGGAGTGATTCATGGGGTGGCTCAAGCACTTGACTACCTTCACGATGGGTGTGAGAAGAGGGTTCTCCACAGAGACATCAAGGCCAGCAACATAATGCTGGACTCAGATTACAATGCCAAGCTGGGAGACTTTGGATTGGCCAGAACAATTCAGAAGAGAGATGAGACACATCACTCTACAAAAGGGATTGCAGGCACACCCGGTTACATGGCCCCAGAAACCTTTCTCATTGGGAGGGCAACGGTGGAGACAGATGTGTATGCATTTGGGGTTCTTGTGTTGGAAGTAGTGTGTGGAAAGAGGCCAGGGAATGTGTATGCACGAGATGACTACAAGAACAGCATTGTGTATTGGGTGTGGGATTTGTATGGGCAGGGAAAAGTAGTTGGTGGTGTTGATGCAAGATTGAAGAAGGAGGAGATTAAGGAGGAAGAGGTGGAGTGTGTTCTTGTTCTTGGTTTGGCTTGTTGCCATCCAAATCCACACAAAAGACCTTCCATGAGAACAGTTCTTCAGGTTCTGAATGGGGAAGCATCTCCACCTCAAGTGCCTAAGGAAAGACCAGCTTTTATGTGGCCTGCTATGCCTCCATATTTCAAAGATGCTGAAGATAGCTCCCTCATCCAGGCAACCCTCACTCCTTTCACTTTCACTGAGATCATTGGAAGATGA 2022 0.4451 MQVPWLVKYQYAATLFVTIALSKVTCFYFNFPTFEPENQSNLWLHDNSKIFLDAIQVTPDIRGSMENYSGRVIYRKPYRLWKQKKNHNQMASFNTTFVLRITPETTPGGEGLAFILTSDMTLPLHSEGEWLGIVNATSNGTSQAAILALEFDTRHSFTEDGPDNHVGININSINSIQQVSLTNNRLNLSSGLDVKFHIQYINDTISVSGAMSGTSEESMETLLVTPPLNLSSFLQQEVYLGFSASTSNYTQRNCVRSWEFSGDDIRDDDKSLLWVYVAVPTVVVLIIIGGLVIFLLRRQKIRHMEWPEDAYPRIEDQIQYSSMAPKKFRLREITKATGGFSLQNKLGQGGFGTVYKGLLENKEVAVKRVSKNSRQGKKEFVAEVTTIGSLHHRNLVKLTGWCYENRELLLVYEFMPKGSLDKYLFGDKDSGNNYNLEGGYSITLNWETRLGVIHGVAQALDYLHDGCEKRVLHRDIKASNIMLDSDYNAKLGDFGLARTIQKRDETHHSTKGIAGTPGYMAPETFLIGRATVETDVYAFGVLVLEVVCGKRPGNVYARDDYKNSIVYWVWDLYGQGKVVGGVDARLKKEEIKEEEVECVLVLGLACCHPNPHKRPSMRTVLQVLNGEASPPQVPKERPAFMWPAMPPYFKDAEDSSLIQATLTPFTFTEIIGR 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00311 673 Pfam Protein tyrosine and serine/threonine kinase 341 623 IPR001245 GO:0004672|GO:0006468
Viun7g00311 673 FunFam Probable L-type lectin-domain containing receptor kinase S.5 26 269 - -
Viun7g00311 673 Pfam Legume lectin domain 29 269 IPR001220 GO:0030246
Viun7g00311 673 Gene3D Phosphorylase Kinase; domain 1 325 414 - -
Viun7g00311 673 CDD STKc_IRAK 346 626 - -
Viun7g00311 673 CDD lectin_legume_LecRK_Arcelin_ConA 27 261 IPR001220 GO:0030246
Viun7g00311 673 FunFam Probable L-type lectin-domain containing receptor kinase S.5 325 414 - -
Viun7g00311 673 Gene3D Transferase(Phosphotransferase) domain 1 415 633 - -
Viun7g00311 673 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 267 IPR013320 -
Viun7g00311 673 ProSitePatterns Protein kinases ATP-binding region signature. 346 367 IPR017441 GO:0005524
Viun7g00311 673 PANTHER - 59 634 - -
Viun7g00311 673 ProSiteProfiles Protein kinase domain profile. 340 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g00311 673 SUPERFAMILY Protein kinase-like (PK-like) 321 624 IPR011009 -
Viun7g00311 673 FunFam probable L-type lectin-domain containing receptor kinase S.5 415 630 - -
Viun7g00311 673 Gene3D - 26 272 - -
Viun7g00311 673 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672|GO:0006468
Viun7g00311 673 SMART serkin_6 340 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00311 Viun-Chr7 2238858 2241048 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00311 69 638 Receptor kinase-like Gene Family AT5G10530 39.590 5.10e-120 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Viun7g00311 PK_Tyr_Ser-Thr 5.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00311 - - gmx:100785031 1083.55