Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00310 ATGCAGCTCCCTTGGTTAGCCAAACATGAACTAGCAGCAACCGTGTTCATTATCGTATCCCTTATTACCCAAGTTACCAGCAACCTTAATTTCAATTTCCCTTTCTTCCAACCAGAGGATGAAGCTCATTTATTGCTCAACGAGAACTCAAAAATCTACTTGAATGCCGTTCAAGTGACCCCTGATATTCGTGGTCCTATCACAAACTATTCAGGCAGGGTATTCTATAAAGAACAACTCAAGTTATGGGACGGTCAAAGAGGAACCAAAACTTCATTCAATTCTAGTTTTGTTTTCAATATTTATCCTGTAAGCTCTCCTGGTGGTGAGGGATTTGCTTTCATATTGACAGACGACACTTCTCTTCAGCTTAACAGTGGAGGCCAATGGCTTGGTATCGTCAACTCAACAAGCACAGGGGTCACTGACATCGTTGGAGTAGAGTTCGATACAAGGAAAAGCTTCCATGAAGATGTTGATGACAACCATGTTGGGGTGGATGTTAAGAGCATCTATTCCATCAAACAACAATCTCTTGGACCATATGGTGTTAATCTCTCTAGCGGCTCTGATGTTGTTGCTACTATTTACTTTGATGCTAAACATGGGAAAATTACTATCTTTGTTAGTATGTTAGGAGATTTGACGGGGAGACCAGTGCTTGTGGTGGATCGTGACCTCTCTGAACTGCTTCCAGAAAATGTTTTTGTGGGGTTTTCAGCTTCCACGGGAGAATATACCCAGCTTAACTCAATAAGATCATGGAATTTCTCTAGCTGGACGGATATTGAGAAGAATCCCAAAACTCTGACATGGCTATGGATCTTCATTCCAATAGCTGGGGTTGGAGGAGTGTGTGTGCTTGCTAGTGTGTGCTATTGGACAAGAAAACACATAAAGGGACGAGGGTTGGAGGAAGATATGAAAATAGAGCTTCAAATCAAAAGCTCTTCCAATGCCCCGCTTAAGTTTCAGCTGAAGGAGCTTTTATCAGCCACAAGGAATTTCCACTCATCAAACAAGCTTGGGAAAGGAGGGTTCGGGATGGTTTACAAAGGCACCTTAAACGGAAAAGATGTTGCTGTGAAGAGGATTTCAAAGAATTCACGTCACGGTAAGCAAGATTTTATAGCAGAAATCACAACCATAGGGAATCTCAATCACAAACATTTAGTGAAGTTACTAGGATGGTGCTATGAAAAGGGTGAGATTGTCCTCGTGTATGAGCTCATGCAGAATAGGAGCTTAGACAGATTCATATTTTCAAATTCTGGAGGCGATTCAACTCTGAATTGGGAAAAGAGGGTGGCTATTTTATGTGGGGTTGCTCGGGCACTAGACTATCTTCACAATGGAAGTGATAATAGAGTGCTGCATAGAGACATAAAGCCAAGCAATGTGATGTTGGATTCAGAATTCAATGCTCGGCTTGGAGACTTTGGCTTAGCTCGCACCATTCATCTTAGTGAAAAATCTCACCACTCAACAAGAGAAATTGCTGGAACACCAGGGTATATGGCGCCAGAAAGCTTACACACACAAAGGGCTTCGGTTGAAACCGATGTCTATGCATTTGGTATTCTGATGCTGGAAGTTGTGTGTGGAAGAAGAAATGCTGAACACAGACAGGACCTGAGATTTTGTAGCAGCATAGTGGAATGGGTTTGGGAGCTTCATGGCAGAGAAAAGATAACTGATGCTGTGGATTTGAGACTGAATGATGATTTTGATAAGGCTGAAGCGAAGTGTGTGTTTGAGTTAGGGTTAGCATGTTGCCATCCTAATCCATATGAGAGGCCATCAATGAGAAGTGTGTTGCTGGTGCTGATAGGGGAAGCTTCTCCTCCATTTGTAGCAGCTGAGAAACCTGCTTTCACATGGCCAGCCACTGCTTCTGTTCTCAACGAAGAGTCAAATTTCCAAGTAATAGTCTCTCAAAATGAACCCATAACAGAATTGAAAAGTGGGAGATGA 1974 0.4245 MQLPWLAKHELAATVFIIVSLITQVTSNLNFNFPFFQPEDEAHLLLNENSKIYLNAVQVTPDIRGPITNYSGRVFYKEQLKLWDGQRGTKTSFNSSFVFNIYPVSSPGGEGFAFILTDDTSLQLNSGGQWLGIVNSTSTGVTDIVGVEFDTRKSFHEDVDDNHVGVDVKSIYSIKQQSLGPYGVNLSSGSDVVATIYFDAKHGKITIFVSMLGDLTGRPVLVVDRDLSELLPENVFVGFSASTGEYTQLNSIRSWNFSSWTDIEKNPKTLTWLWIFIPIAGVGGVCVLASVCYWTRKHIKGRGLEEDMKIELQIKSSSNAPLKFQLKELLSATRNFHSSNKLGKGGFGMVYKGTLNGKDVAVKRISKNSRHGKQDFIAEITTIGNLNHKHLVKLLGWCYEKGEIVLVYELMQNRSLDRFIFSNSGGDSTLNWEKRVAILCGVARALDYLHNGSDNRVLHRDIKPSNVMLDSEFNARLGDFGLARTIHLSEKSHHSTREIAGTPGYMAPESLHTQRASVETDVYAFGILMLEVVCGRRNAEHRQDLRFCSSIVEWVWELHGREKITDAVDLRLNDDFDKAEAKCVFELGLACCHPNPYERPSMRSVLLVLIGEASPPFVAAEKPAFTWPATASVLNEESNFQVIVSQNEPITELKSGR 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00310 657 SUPERFAMILY Concanavalin A-like lectins/glucanases 28 260 IPR013320 -
Viun7g00310 657 ProSiteProfiles Protein kinase domain profile. 336 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g00310 657 FunFam Lectin-domain containing receptor kinase A4.3 411 629 - -
Viun7g00310 657 SUPERFAMILY Protein kinase-like (PK-like) 317 609 IPR011009 -
Viun7g00310 657 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672|GO:0006468
Viun7g00310 657 CDD lectin_legume_LecRK_Arcelin_ConA 29 259 IPR001220 GO:0030246
Viun7g00310 657 ProSitePatterns Protein kinases ATP-binding region signature. 342 363 IPR017441 GO:0005524
Viun7g00310 657 CDD STKc_IRAK 342 609 - -
Viun7g00310 657 Gene3D Phosphorylase Kinase; domain 1 314 410 - -
Viun7g00310 657 PANTHER - 58 616 - -
Viun7g00310 657 Pfam Protein kinase domain 336 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g00310 657 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 308 410 - -
Viun7g00310 657 Pfam Legume lectin domain 29 265 IPR001220 GO:0030246
Viun7g00310 657 SMART serkin_6 336 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g00310 657 Gene3D - 27 271 - -
Viun7g00310 657 Gene3D Transferase(Phosphotransferase) domain 1 411 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00310 Viun-Chr7 2227463 2229888 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00310 5 648 Receptor kinase-like Gene Family AT5G55830 35.620 1.54e-117 364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Viun7g00310 Pkinase 9.9e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00310 - - tcc:108661882 721.85