Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00309 ATGTACATGCTCTATCTTCACAACTTCAGTTCCTTCCCACAATTTTTTCTTAAGCTTCTTATTATTGCAAGTCTACTTTGTGGTTCTGTAGTTCATGTGGGGTGTTTGAATTTCAGCTATCCAACTTTCTACTATGAAAACGGGACAGATTTCAATAGGTCTACAAATTCAATCATAGAGAAGGGTACAATTAAAATCCCCATAGAAGGTTCAGGATCAGAGATCTCAAACCTTTCTGGTAGGGTCTTCTATAGTGAACGGTTGAAGCTAAGGGACACTCAAAGGCGCATGAAAGCCTCATTCAATTCTTCTTTTGTTTTCAATATTGATCCTTTAACCACTCCTGGTGGCGAGGGATTTGCTTTCATATTGACAGATGATACCTCTCTTCAACTTAACAGTGGAGGCCAATGGCTTGGTATTGTCAACCCAACAAGCATAGGGGTTTCTGACATAGTTGCAGTGGAGTTCGATACTAGGAAAAGCTACACTGAAGATGTTGATGACAACCATGTTGGGGTGGATGTTAAGAGCATCTATTCCATCAATCAAGAACCTCTTGGACCACACGGTGTTAATCTCTCTAGTGGAATTGATGTTTTTGCTACTGTTTACTTTGATGCTGAAGGTGGGAATATGATGATTTCTGTTTCTCCATCAGATTTTATGTTGAGGACACCACCAGTGCTTGAGGTGCATCTTGATCTCTCTAAACTTCTTCCAGAAGATGTTTTTGTGGGATTTTCAGCTTCCACAGGGGTATATACTCAGATCAACACAATACGATCATGGTATTTCTCTAGCATGGAGCATATTGACATCGATCCCATAAGTCAAGTACGGTTATGGATATGGATTCCAATAATTGTGGTTGGAGGAGTATGTGGGCTTGCTGGTGCATTGTATTGGAGAAAAAAACGCAGAAAGAGACAACGGACTGAAGAAGATCTGAACATAGAGCTTGAAATTAAAAGCTCATCTAATGCTCCACATAAGTTTCATCTGAAGGAGATTCTGTCTGCCACAAAGAACTTCCACCCTTCAAACAAGCTCGGGAAAGGAGGGTTCGGGATGGTTTATAGAGGCACTTTAAACGGAAAAGATGTTGCTGTGAAGAGGATTTCAAAGAACACACGTCATGGTAAGCAAGACTTTATAGCAGAGATCAGAACCATAGGGAATCTGAATCATAAAAATCTGGTGAAGCTAATAGGATGGTGCTATGAGAAGGGTGAGATCCTCCTTGTGTATGATCTAATGCAAAATGGTAGCTTAGACAGATTCATATTTTCAACAACAGGAGGGGATTCAAGTCTGAGTTGGGAAAGGAGGCTTAGTGTGATATGTGGGGTTTCAAGGGCTCTGGAATATCTTCACAATGGATGTGATAAAAGAGTGCTCCACAGAGACATAAAACCAAGCAATGTGATGTTGGATTCGGACTTCAATGCTCGGCTTGGAGATTTTGGCTTGGCTCGCACCATCAATCTCAGTGAAGAAACTCACCACTCAACAAAAGAAATTGCTGGAACATTAGGGTACATGGCACCAGAAAGCTTCCACACGCGGAGGGCATCTGTTGAAACTGATGTGTATGCATTTGGGGTTCTGGTTCTGGAAGTTGTGTGTGGAGGAAGAAATGTTGAACACAAACAGAATGTGAGCATTTTGGAGTGGGTTTGGGAGCTTCATGGCAGAGAAAACATAACTGAGGCTGTGGATTTGAGTCTGAAGGGTGATTTTGATAAGGTTGAAGCCAAGTGTGTGCTTGAGTTGGGGCTAGCATGCTGCCATCCTAACCCGTGTGAGAGGCCATCAATGAGAACTGTGTTGCAGGTTCTAACGGGGGAAGCACCTCCACCTTCTGTACCATTTCAGAAACCTGCTTTCACATGGCCTGCCACTGCTCCTCTTCTCAACAACCACTTCAATTCTCAGGTTACAGTCTCCCAAAATGAACCAATAACTGAAATAACTAGTGGAAGATGA 1989 0.4223 MYMLYLHNFSSFPQFFLKLLIIASLLCGSVVHVGCLNFSYPTFYYENGTDFNRSTNSIIEKGTIKIPIEGSGSEISNLSGRVFYSERLKLRDTQRRMKASFNSSFVFNIDPLTTPGGEGFAFILTDDTSLQLNSGGQWLGIVNPTSIGVSDIVAVEFDTRKSYTEDVDDNHVGVDVKSIYSINQEPLGPHGVNLSSGIDVFATVYFDAEGGNMMISVSPSDFMLRTPPVLEVHLDLSKLLPEDVFVGFSASTGVYTQINTIRSWYFSSMEHIDIDPISQVRLWIWIPIIVVGGVCGLAGALYWRKKRRKRQRTEEDLNIELEIKSSSNAPHKFHLKEILSATKNFHPSNKLGKGGFGMVYRGTLNGKDVAVKRISKNTRHGKQDFIAEIRTIGNLNHKNLVKLIGWCYEKGEILLVYDLMQNGSLDRFIFSTTGGDSSLSWERRLSVICGVSRALEYLHNGCDKRVLHRDIKPSNVMLDSDFNARLGDFGLARTINLSEETHHSTKEIAGTLGYMAPESFHTRRASVETDVYAFGVLVLEVVCGGRNVEHKQNVSILEWVWELHGRENITEAVDLSLKGDFDKVEAKCVLELGLACCHPNPCERPSMRTVLQVLTGEAPPPSVPFQKPAFTWPATAPLLNNHFNSQVTVSQNEPITEITSGR 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00309 662 SUPERFAMILY Protein kinase-like (PK-like) 326 614 IPR011009 -
Viun7g00309 662 Gene3D Transferase(Phosphotransferase) domain 1 420 619 - -
Viun7g00309 662 SMART serkin_6 345 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g00309 662 FunFam serine/threonine-protein kinase PBS1-like 309 419 - -
Viun7g00309 662 FunFam L-type lectin-domain containing receptor kinase IX.1 420 624 - -
Viun7g00309 662 Gene3D Phosphorylase Kinase; domain 1 323 419 - -
Viun7g00309 662 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Viun7g00309 662 Pfam Protein kinase domain 346 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g00309 662 ProSitePatterns Protein kinases ATP-binding region signature. 351 372 IPR017441 GO:0005524
Viun7g00309 662 CDD lectin_legume_LecRK_Arcelin_ConA 36 268 IPR001220 GO:0030246
Viun7g00309 662 Gene3D - 34 275 - -
Viun7g00309 662 CDD STKc_IRAK 351 616 - -
Viun7g00309 662 ProSitePatterns Legume lectins beta-chain signature. 153 159 IPR019825 -
Viun7g00309 662 ProSiteProfiles Protein kinase domain profile. 345 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g00309 662 PANTHER - 65 621 - -
Viun7g00309 662 Pfam Legume lectin domain 36 271 IPR001220 GO:0030246
Viun7g00309 662 SUPERFAMILY Concanavalin A-like lectins/glucanases 35 274 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00309 Viun-Chr7 2224110 2226517 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00309 36 632 Receptor kinase-like Gene Family AT5G55830 37.267 3.50e-123 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Viun7g00309 Pkinase 2.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00309 - - tcc:108661882 709.909