Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00298 ATGTCGTGTTGTGGAGGTGCTGAAGAGGATTTTGGCATTCCACCTGCAAACCAAAACAATGCATCACTCGACAAGGGTAGTGTATATGGTGGTGGAGGAGGAGATAGAGGAGAGCCAAGGGGCAATATAGTCAAAAGTGGTGCTCCAAAGAAAGAATTACCAATTGAGATACCAGCCATCTCATTGGATGAGTTAAATCAATTAACAGACAACTTTGGTACAAATGCTTTGATAGGAGAAGGTTCATATGGAAGGGTTTACTTTGCAAAGATGAATGATGATAACGAAGTGGCAATCAAAAAGCTAGATACTACTTCTTCTCCAGAACCTGACTCTGATTTTGCAGCACAATTATCAGTTGTTTCAAGATTGAAAAGTGACCATTTTGTGGAATTGTTGGGATATTGTTTAGAGGAAAATAACAGAATTTTGGTTTATCAATATGCGAGTTTGGGTTCTTTGCACGACATATTACATGGAAGAAAAGGAGTACAAGGTGCTGAACCCGGTCCAGTTTTAAATTGGAGCCAAAGAGTAAAAATTGCATTTGGTGCAGCAAAAGGACTTGAGTTTCTTCATGAAAAGTGTCAACCTTCTATAGTTCATCGCGATGTTAGATCTAGCAATGTCTTACTCTTTAATGACTATGAATCCAAGATTGCAGATTTCAACTTGACAAACCAATCTTCTGACACTGCAGCTCGATTACACTCAACAAGAGTCTTAGGAACATTTGGTTATCATGCTCCAGAGTATGCAATGACAGGACAAATAACCCAAAAAAGTGATGTTTATAGTTTTGGGGTTGTGCTTTTGGAACTTTTAACTGGAAGAAAACCTGTTGACCATACAATGCCTAAAGGGCAACAAAGTCTTGTAACTTGGGCAACTCCAAGATTGAGTGAGGACAAAGTGAAACAATGCGTGGATCCTAAATTGAATAACGAATACCCTCCTAAGGCAATTGCGAAGTTAGCAGCGGTTGCAGCACTTTGTGTGCAATACGAGGCTGATTTCAGGCCAAACATGACAATTGTTGTCAAAGCTCTCCAACCACTTCTCAATTCTAAACCGACTGGTCCTGATCCTAACTCTAACTCTAACCCTAACGCTTAG 1116 0.3987 MSCCGGAEEDFGIPPANQNNASLDKGSVYGGGGGDRGEPRGNIVKSGAPKKELPIEIPAISLDELNQLTDNFGTNALIGEGSYGRVYFAKMNDDNEVAIKKLDTTSSPEPDSDFAAQLSVVSRLKSDHFVELLGYCLEENNRILVYQYASLGSLHDILHGRKGVQGAEPGPVLNWSQRVKIAFGAAKGLEFLHEKCQPSIVHRDVRSSNVLLFNDYESKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLNNEYPPKAIAKLAAVAALCVQYEADFRPNMTIVVKALQPLLNSKPTGPDPNSNSNPNA 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00298 371 FunFam Pti1 kinase-like protein 48 148 - -
Viun7g00298 371 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 25 359 - -
Viun7g00298 371 Gene3D Phosphorylase Kinase; domain 1 45 148 - -
Viun7g00298 371 ProSiteProfiles Protein kinase domain profile. 72 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g00298 371 FunFam PTI1-like tyrosine-protein kinase 3 150 359 - -
Viun7g00298 371 Gene3D Transferase(Phosphotransferase) domain 1 150 365 - -
Viun7g00298 371 SMART tyrkin_6 72 350 IPR020635 GO:0004713|GO:0006468
Viun7g00298 371 ProSitePatterns Tyrosine protein kinases specific active-site signature. 200 212 IPR008266 GO:0004672|GO:0006468
Viun7g00298 371 Pfam Protein tyrosine and serine/threonine kinase 76 350 IPR001245 GO:0004672|GO:0006468
Viun7g00298 371 SUPERFAMILY Protein kinase-like (PK-like) 53 350 IPR011009 -
Viun7g00298 371 MobiDBLite consensus disorder prediction 1 47 - -
Viun7g00298 371 ProSitePatterns Protein kinases ATP-binding region signature. 78 101 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00298 Viun-Chr7 2107136 2110665 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00298 57 357 Receptor kinase-like Gene Family AT3G58690 44.371 1.93e-86 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Viun7g00298 PK_Tyr_Ser-Thr 5.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00298 - - pvu:PHAVU_007G261200g 684.1