Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00276 ATGGCAGTGTCTTCTTCATTCTCACGCCGCTTCTTCGTAAAACCGTTTCCCCTCTTTTCCTTCTATTTCTCATTCTCCACCGCTTCGCCATCGCCGCCTCCGATCCGAGTCGCGCTTACCGAGTCCGTCGGACGAGCCGTCTTCGCCACGCGCCCCATCGGCGCCGCCGACCTCATCCACACCGCCAGCCCCGCCGTTTGCCACCCCTACTCCGGCCGCGCCTCCTGCTATTCCTGTCTCGCCGCGCTCCCTCACTCCCATCCTCCCCGCGCGCCCTTTTGCAGCCAACACTGCCAACAACGATCCAAGGGATATTACGATGTTGAGATGAAAGCAAATTGGGTGGCTTTTGATGACTATTGTGGGTCTCGTGGGTTGAAGTATCCCTTTCTGGTAAAGCGATTGGCTTGCATGGTCATAGCAGGAGATGCCAGAAGTGACACTCTTGACATACTCCAGCCTGCCAATTTTACGCCTGAGATGGTATCAGAGATGGAAGAGGAGTTTGTCTTGCTGAGGAATGCCTTCGCGGAGGCACTTATTGGAGATGATCGTATTGCCTTTTTAACTAAGCAATGGTACATTAACGCTTTGGCTCGAATTCGAATCAATGCATTTCGGATTGAGTTGGTCGGAGGACGGTATGAAGATCTTCTTTCATTAGCGGTTGCATCTGTGGAAGCTGAGGCTGCTGTTGGAAATGCTGTCTATATACTTCCGTCCTTCTACAATCATGATTGTGATCCTAATGCACACATCATATGGATAGATAACGCTCATGCAAAATTGAAGGCACTCCGTGACATTGATGAAGGTGAAGAACTCAGAATATGCTATATTGATGCCAGCCTGGACCGCGATGCTAGAAGAGAGCTTCTGCTTCGAGGTTTTGGTTTTCAATGCAATTGTAGTAAGTGCTTACATGGCGATTAA 933 0.5027 MAVSSSFSRRFFVKPFPLFSFYFSFSTASPSPPPIRVALTESVGRAVFATRPIGAADLIHTASPAVCHPYSGRASCYSCLAALPHSHPPRAPFCSQHCQQRSKGYYDVEMKANWVAFDDYCGSRGLKYPFLVKRLACMVIAGDARSDTLDILQPANFTPEMVSEMEEEFVLLRNAFAEALIGDDRIAFLTKQWYINALARIRINAFRIELVGGRYEDLLSLAVASVEAEAAVGNAVYILPSFYNHDCDPNAHIIWIDNAHAKLKALRDIDEGEELRICYIDASLDRDARRELLLRGFGFQCNCSKCLHGD 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00276 310 SMART set_7 33 286 IPR001214 GO:0005515
Viun7g00276 310 CDD SET_SMYD 233 306 - -
Viun7g00276 310 Gene3D SET domain 46 306 IPR046341 -
Viun7g00276 310 Pfam SET domain 44 279 IPR001214 GO:0005515
Viun7g00276 310 SUPERFAMILY SET domain 33 306 IPR046341 -
Viun7g00276 310 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD 31 308 - -
Viun7g00276 310 Gene3D - 75 119 - -
Viun7g00276 310 Gene3D - 120 205 - -
Viun7g00276 310 ProSiteProfiles SET domain profile. 33 280 IPR001214 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Viun7g00276 SET 2.8e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00276 - - gmx:100801270 483.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g00276 7 1921626 1927530 Viun7g00276 7 1921626 1927530 ECH