Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00274 ATGAGGGGAAGAAGCTACAGTTATAGTCCGTCACCTCCAAGGCATTATAGCCGAAGAAGGCGCAGTCCCAGCCCTAGGGGCAGACACAGAGGACGTGATAGAGATTTGCCAACTAGTCTTTTGGTTCGAAACCTTCACAGAGATTGTAGGGCGGAAGATCTGCATGGTCCATTTGGCCAATTTGGTCCTGTTAAGGACGTTTACCTGCCTCGAGATTATTATACTGGGGATCCAAGAGGTTTCGGGTTTGTCCAGTATGTGGACCCAGCTGATGCTGCGGATGCAAAACATCACATGGACGGTCAAATTCTTCTTGGTCGCGAGTTAACTGTAGTGTTTGCTGAAGAGAACAGGAAGAAACCTTCTGAAATGAGAGCAAGGGAACGGAGAAGGGATCGATCATATGATTACAGGCGATCGCCTCGAACCTATTCTCCTAGTCCAGACTATTCACCTTCTCCAAGACGAAGACGAAATTACAGGTCAATCTCACCAAGGGGCAGAAAATATAGCGATCGATCATACTCTAGATCACCTTATGGGTCAAGAAGCCGCAGCAGAAGCAGGAGTTATGGCAGAAGCAGAAGTTACAGCAGGAGCTTGAGCAGAAGTCCTGGCTACTCTAGGTGA 630 0.481 MRGRSYSYSPSPPRHYSRRRRSPSPRGRHRGRDRDLPTSLLVRNLHRDCRAEDLHGPFGQFGPVKDVYLPRDYYTGDPRGFGFVQYVDPADAADAKHHMDGQILLGRELTVVFAEENRKKPSEMRARERRRDRSYDYRRSPRTYSPSPDYSPSPRRRRNYRSISPRGRKYSDRSYSRSPYGSRSRSRSRSYGRSRSYSRSLSRSPGYSR 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00274 209 MobiDBLite consensus disorder prediction 1 37 - -
Viun7g00274 209 Gene3D - 2 130 IPR012677 -
Viun7g00274 209 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 38 116 IPR000504 GO:0003723
Viun7g00274 209 MobiDBLite consensus disorder prediction 118 139 - -
Viun7g00274 209 MobiDBLite consensus disorder prediction 175 209 - -
Viun7g00274 209 MobiDBLite consensus disorder prediction 118 209 - -
Viun7g00274 209 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 40 109 IPR000504 GO:0003723
Viun7g00274 209 SUPERFAMILY RNA-binding domain, RBD 38 142 IPR035979 GO:0003676
Viun7g00274 209 PANTHER RIBONUCLEIC ACID BINDING PROTEIN S1 17 204 - -
Viun7g00274 209 SMART rrm1_1 39 112 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00274 Viun-Chr7 1910364 1913400 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00274 38 206 Eukaryotic Initiation Factors Gene Family AT4G34110 25.882 2.46e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00274 K12900 - gmx:100816913 203.756