Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00244 ATGGGCAACAACTGCGTGGGACCGAACGTCGGTAACGGCTTCCTCCAGTCCGTTACGGCGGCGGTGTGGAAAACGCGCCCGCCGGAGTCCCGCCTTCCACCGCCTTCCGCCGATTCCAAAACCTCGACTCCGGTAGCAAACGCCCAGAAAGCCTCGGAACCCGCGCCTTCAAAACCGTCGGATCCCCCGAACCGGGTGCAGAACACGCCGCCCGAGCCGGTCAAAATGCCCGAGCCCCTGGACCACGAGAAGCCGGCGTCAAGCCACCCGGAGTCGACCCCTGACAAGGCTAAGAAACCCACGCACGTGAAACGGAATTCCAGTATGGGACTACAAGTGGATTCGGTGCTGGGTCGAAAAACAGAGAATATGAAAGAGTTCTTCAGCTTGGGGAGGAAGCTAGGGCAGGGGCAATTCGGGACGACGTTTATGTGCGTGCAAAAGGGGACGAACAAGGAGTTCGCCTGCAAGTCCATCGCGAAGCGGAAGTTGACGACGCAAGAGGATGTGGAGGATGTGAGGAGGGAGATTCAGATCATGCACCACTTGGCGGGGCACCCCAACGTGGTTCAGATCGTTGGGGCATACGAGGACGCCGTTGCGGTTCACCTCGTGATGGAGCTCTGCGCAGGAGGGGAGCTCTTTGACAGGATCATACAGAGGGGGCATTACACCGAGAGGAAGGCCGCGGATCTTTCTAGGTTGATTGTTAGTGTGGTGGAGGCTTGTCACTCTCTTGGGGTCATGCACAGGGACTTGAAGCCCGAGAATTTTTTGTTCATGAATCAGCAGGAAGAATCTCCCCTTAAGACCATTGATTTTGGACTCTCCGTGTTCTTTAGACCAGGTGAAACATTCACTGATGTGGTTGGGAGCCCATACTATGTGGCCCCTGAAGTTTTGCGGAAGCACTATGGTCCAGAATGTGATGTTTGGAGTGCTGGGGTGATCATCTATATTTTACTCAGTGGAGTTCCCCCATTTTGGGATGAAACGGAACAGGGAATATTTGAGCAAGTTTTGAAAGGAGAGCTTGACTTTGTTTCTGAACCCTGGCCAAGCATATCTGAAAGCGCAAAGGATCTTGTTCGAAGGATGCTTATAAGGGACCCTAAAAAGCGGCTGACAGCACATGAAGTTCTTTGCCATCCATGGGTGCAAGTCGGAGGCGTTGCTCCTGATAAGCCACTTGATTCTGCTGTCTTGAGTCGTTTGAAGCAGTTCTCTGCAATGAATAAGCTAAAAAAAATAGCCATTCGAGTAATTGCTGAAAGTTTGTCTGAGGAAGAAATTGCAGGACTGAGAGAAATGTTCAAGATGATAGACACAGATAATAGCGGACAGATCACTCTTGAGGAACTGAAAAATGGTTTGGAGAGAGTGGGTTCTGTTCTTAAGGATTCTGAAATTGCTTGGTTAATGCAAGCGGCAGACGTTGATAACAGTGGTACCATAGACTACGGTGAATTCATAGCAGCTATGGTACACCTAAACAAGATCCAGAAGGAAGATCATCTATATGCAGCATTCACATACTTTGACAAAGATGGGAGTGGATACATTACACCCGATGAGCTCCAACTAGCCTGCGAACAGTTTGGCTTGCAGGATTTTCACCTGGATGAGATAATACGTGAAATTGACCAGGATAATGATGGACGCATTGATTACAATGAGTTTGTTGCCATGATGCAAGATACTGGATTTGGCAAAAAGTGA 1719 0.5003 MGNNCVGPNVGNGFLQSVTAAVWKTRPPESRLPPPSADSKTSTPVANAQKASEPAPSKPSDPPNRVQNTPPEPVKMPEPLDHEKPASSHPESTPDKAKKPTHVKRNSSMGLQVDSVLGRKTENMKEFFSLGRKLGQGQFGTTFMCVQKGTNKEFACKSIAKRKLTTQEDVEDVRREIQIMHHLAGHPNVVQIVGAYEDAVAVHLVMELCAGGELFDRIIQRGHYTERKAADLSRLIVSVVEACHSLGVMHRDLKPENFLFMNQQEESPLKTIDFGLSVFFRPGETFTDVVGSPYYVAPEVLRKHYGPECDVWSAGVIIYILLSGVPPFWDETEQGIFEQVLKGELDFVSEPWPSISESAKDLVRRMLIRDPKKRLTAHEVLCHPWVQVGGVAPDKPLDSAVLSRLKQFSAMNKLKKIAIRVIAESLSEEEIAGLREMFKMIDTDNSGQITLEELKNGLERVGSVLKDSEIAWLMQAADVDNSGTIDYGEFIAAMVHLNKIQKEDHLYAAFTYFDKDGSGYITPDELQLACEQFGLQDFHLDEIIREIDQDNDGRIDYNEFVAMMQDTGFGKK 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00244 572 Pfam Protein kinase domain 129 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g00244 572 ProSitePatterns EF-hand calcium-binding domain. 548 560 IPR018247 -
Viun7g00244 572 Gene3D - 402 495 - -
Viun7g00244 572 ProSiteProfiles EF-hand calcium-binding domain profile. 429 464 IPR002048 GO:0005509
Viun7g00244 572 ProSiteProfiles EF-hand calcium-binding domain profile. 465 500 IPR002048 GO:0005509
Viun7g00244 572 ProSiteProfiles Protein kinase domain profile. 128 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g00244 572 MobiDBLite consensus disorder prediction 76 102 - -
Viun7g00244 572 ProSitePatterns Protein kinases ATP-binding region signature. 134 161 IPR017441 GO:0005524
Viun7g00244 572 MobiDBLite consensus disorder prediction 56 75 - -
Viun7g00244 572 FunFam Calcium-dependent protein kinase SK5 214 398 - -
Viun7g00244 572 FunFam Calcium-dependent protein kinase 1 394 568 - -
Viun7g00244 572 ProSitePatterns EF-hand calcium-binding domain. 478 490 IPR018247 -
Viun7g00244 572 CDD EFh 434 494 IPR002048 GO:0005509
Viun7g00244 572 ProSitePatterns Serine/Threonine protein kinases active-site signature. 248 260 IPR008271 GO:0004672|GO:0006468
Viun7g00244 572 PANTHER SERINE/THREONINE-PROTEIN KINASE 120 560 - -
Viun7g00244 572 ProSitePatterns EF-hand calcium-binding domain. 442 454 IPR018247 -
Viun7g00244 572 Gene3D Transferase(Phosphotransferase) domain 1 214 390 - -
Viun7g00244 572 Gene3D - 412 564 - -
Viun7g00244 572 CDD STKc_CAMK 127 385 - -
Viun7g00244 572 Gene3D Phosphorylase Kinase; domain 1 130 213 - -
Viun7g00244 572 CDD EFh 508 565 IPR002048 GO:0005509
Viun7g00244 572 SMART serkin_6 128 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g00244 572 MobiDBLite consensus disorder prediction 35 54 - -
Viun7g00244 572 ProSiteProfiles EF-hand calcium-binding domain profile. 535 570 IPR002048 GO:0005509
Viun7g00244 572 SUPERFAMILY Protein kinase-like (PK-like) 128 387 IPR011009 -
Viun7g00244 572 ProSiteProfiles EF-hand calcium-binding domain profile. 501 534 IPR002048 GO:0005509
Viun7g00244 572 SMART efh_1 433 461 IPR002048 GO:0005509
Viun7g00244 572 SMART efh_1 539 567 IPR002048 GO:0005509
Viun7g00244 572 SMART efh_1 469 497 IPR002048 GO:0005509
Viun7g00244 572 SMART efh_1 505 533 IPR002048 GO:0005509
Viun7g00244 572 FunFam Calcium-dependent protein kinase 1 130 213 - -
Viun7g00244 572 Pfam EF-hand domain pair 434 494 IPR002048 GO:0005509
Viun7g00244 572 Pfam EF-hand domain pair 504 565 IPR002048 GO:0005509
Viun7g00244 572 MobiDBLite consensus disorder prediction 21 117 - -
Viun7g00244 572 SUPERFAMILY EF-hand 426 565 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00244 Viun-Chr7 1685764 1692233 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00244 1 571 EF-hand Containing Proteins AT2G38910 75.430 0.0 895
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Viun7g00244 Pkinase 5.7e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00244 K13412 K05681 gmx:100813232 1001.5